RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 HACD3Q9P035 362 aa23.21■■□□□ 1.31
HOMER3-205ENST00000542541 SERGEFQ9UGK8 458 aa23.21■■□□□ 1.31
HOMER3-205ENST00000542541 FBXO4Q9UKT5 387 aa23.21■■□□□ 1.31
HOMER3-205ENST00000542541 ESYT3A0FGR9 886 aa23.2■■□□□ 1.3
HOMER3-205ENST00000542541 FAM86C2PA6NEL3 165 aa23.2■■□□□ 1.3
HOMER3-205ENST00000542541 BHMG1C9JSJ3 638 aaPredicted RBP23.2■■□□□ 1.3
HOMER3-205ENST00000542541 CTPS1P17812 591 aa23.2■■□□□ 1.3
HOMER3-205ENST00000542541 GRIA1P42261 906 aa23.2■■□□□ 1.3
HOMER3-205ENST00000542541 ART4Q93070 314 aa23.2■■□□□ 1.3
HOMER3-205ENST00000542541 LYSMD1Q96S90 227 aa23.2■■□□□ 1.3
HOMER3-205ENST00000542541 TPSD1Q9BZJ3 242 aa23.2■■□□□ 1.3
HOMER3-205ENST00000542541 BTBD1Q9H0C5 482 aa23.2■■□□□ 1.3
HOMER3-205ENST00000542541 KDM4CQ9H3R0 1056 aa23.2■■□□□ 1.3
HOMER3-205ENST00000542541 TRABDQ9H4I3 376 aa23.2■■□□□ 1.3
HOMER3-205ENST00000542541 SGK2Q9HBY8 427 aa23.2■■□□□ 1.3
HOMER3-205ENST00000542541 BFARQ9NZS9 450 aa23.2■■□□□ 1.3
HOMER3-205ENST00000542541 ZDBF2Q9HCK1 2354 aa23.2■■□□□ 1.3
HOMER3-205ENST00000542541 CAPN8A6NHC0 703 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 GOLGA8MH3BSY2 632 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 AREL1O15033 823 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 TSPAN6O43657 245 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 HNF1BP35680 557 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 ABL2P42684 1182 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 PXNP49023 591 aaPredicted RBP23.19■■□□□ 1.3
HOMER3-205ENST00000542541 NPY2RP49146 381 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 PLTPP55058 493 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 CUL1Q13616 776 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 USP39Q53GS9 565 aaKnown RBP23.19■■□□□ 1.3
HOMER3-205ENST00000542541 TMEM31Q5JXX7 168 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 OR14C36Q8NHC7 312 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 GDF3Q9NR23 364 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 FADS3Q9Y5Q0 445 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 PLRG1O43660 514 aaKnown RBP23.19■■□□□ 1.3
HOMER3-205ENST00000542541 ALPIP09923 528 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 VIPR1P32241 457 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 NUBP1P53384 320 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 CSTF1Q05048 431 aaKnown RBP23.19■■□□□ 1.3
HOMER3-205ENST00000542541 LRRC73Q5JTD7 316 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 FAM124AQ86V42 546 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 PDIK1LQ8N165 341 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 IFT81Q8WYA0 676 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 RUBCNQ92622 972 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 SERPINB12Q96P63 405 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 B4GALT6Q9UBX8 382 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 CYP8B1Q9UNU6 501 aa23.19■■□□□ 1.3
HOMER3-205ENST00000542541 TP73O15350 636 aa23.18■■□□□ 1.3
HOMER3-205ENST00000542541 PRKCGP05129 697 aa23.18■■□□□ 1.3
HOMER3-205ENST00000542541 TPH1P17752 444 aa23.18■■□□□ 1.3
HOMER3-205ENST00000542541 MMP12P39900 470 aa23.18■■□□□ 1.3
HOMER3-205ENST00000542541 LAMB3Q13751 1172 aa23.18■■□□□ 1.3
HOMER3-205ENST00000542541 ARHGEF7Q14155 803 aa23.18■■□□□ 1.3
HOMER3-205ENST00000542541 TRADDQ15628 312 aa23.18■■□□□ 1.3
HOMER3-205ENST00000542541 NEK5Q6P3R8 708 aa23.18■■□□□ 1.3
HOMER3-205ENST00000542541 DPPA4Q7L190 304 aa23.18■■□□□ 1.3
HOMER3-205ENST00000542541 CAND1Q86VP6 1230 aaKnown RBP23.18■■□□□ 1.3
HOMER3-205ENST00000542541 BRSK1Q8TDC3 778 aa23.18■■□□□ 1.3
HOMER3-205ENST00000542541 BLOC1S5Q8TDH9 187 aa23.18■■□□□ 1.3
HOMER3-205ENST00000542541 FAM126AQ9BYI3 521 aaPredicted RBP23.18■■□□□ 1.3
HOMER3-205ENST00000542541 FOXP3Q9BZS1 431 aa23.18■■□□□ 1.3
HOMER3-205ENST00000542541 ANKRD36A6QL64 1941 aa23.17■■□□□ 1.3
HOMER3-205ENST00000542541 LRRC72A6NJI9 287 aa23.17■■□□□ 1.3
HOMER3-205ENST00000542541 PPFIA2O75334 1257 aa23.17■■□□□ 1.3
HOMER3-205ENST00000542541 CRTAMO95727 393 aa23.17■■□□□ 1.3
HOMER3-205ENST00000542541 ZNF30P17039 623 aa23.17■■□□□ 1.3
HOMER3-205ENST00000542541 CD6P30203 668 aa23.17■■□□□ 1.3
HOMER3-205ENST00000542541 ADPRHP54922 357 aa23.17■■□□□ 1.3
HOMER3-205ENST00000542541 ARL4CP56559 192 aa23.17■■□□□ 1.3
HOMER3-205ENST00000542541 SESN2P58004 480 aaPredicted RBP23.17■■□□□ 1.3
HOMER3-205ENST00000542541 TAS2R38P59533 333 aa23.17■■□□□ 1.3
HOMER3-205ENST00000542541 HLTFQ14527 1009 aaKnown RBP eCLIP23.17■■□□□ 1.3
HOMER3-205ENST00000542541 TMEM52BQ4KMG9 183 aa23.17■■□□□ 1.3
HOMER3-205ENST00000542541 TSSK4Q6SA08 328 aa23.17■■□□□ 1.3
HOMER3-205ENST00000542541 ZNF534Q76KX8 674 aa23.17■■□□□ 1.3
HOMER3-205ENST00000542541 SPACA7Q96KW9 195 aa23.17■■□□□ 1.3
HOMER3-205ENST00000542541 IL22Q9GZX6 179 aa23.17■■□□□ 1.3
HOMER3-205ENST00000542541 PREBQ9HCU5 417 aa23.17■■□□□ 1.3
HOMER3-205ENST00000542541 PIH1D1Q9NWS0 290 aaKnown RBP23.17■■□□□ 1.3
HOMER3-205ENST00000542541 NPIPB15A6NHN6 443 aaPredicted RBP23.16■■□□□ 1.3
HOMER3-205ENST00000542541 SDR42E2A6NKP2 422 aa23.16■■□□□ 1.3
HOMER3-205ENST00000542541 H0Y858 1186 aa23.16■■□□□ 1.3
HOMER3-205ENST00000542541 PCDH8O95206 1070 aa23.16■■□□□ 1.3
HOMER3-205ENST00000542541 PIRTP0C851 137 aa23.16■■□□□ 1.3
HOMER3-205ENST00000542541 PDE1BQ01064 536 aa23.16■■□□□ 1.3
HOMER3-205ENST00000542541 HIF1AQ16665 826 aa23.16■■□□□ 1.3
HOMER3-205ENST00000542541 DNAJC21Q5F1R6 531 aaKnown RBP23.16■■□□□ 1.3
HOMER3-205ENST00000542541 ARMC3Q5W041 872 aa23.16■■□□□ 1.3
HOMER3-205ENST00000542541 MAML2Q8IZL2 1156 aaPredicted RBP23.16■■□□□ 1.3
HOMER3-205ENST00000542541 ZCCHC9Q8N567 271 aaKnown RBP23.16■■□□□ 1.3
HOMER3-205ENST00000542541 FBXO25Q8TCJ0 367 aa23.16■■□□□ 1.3
HOMER3-205ENST00000542541 GPR63Q9BZJ6 419 aa23.16■■□□□ 1.3
HOMER3-205ENST00000542541 ZFYVE1Q9HBF4 777 aa23.16■■□□□ 1.3
HOMER3-205ENST00000542541 MTRF1LQ9UGC7 380 aaKnown RBP23.16■■□□□ 1.3
HOMER3-205ENST00000542541 ZNF711Q9Y462 761 aa23.16■■□□□ 1.3
HOMER3-205ENST00000542541 TBC1D3DA0A087WVF3 549 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 TBC1D3IA0A087WXS9 549 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 TBC1D3EA0A087X179 549 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 TBC1D3KA0A087X1G2 549 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 C1orf232A0A0U1RR37 186 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 TBC1D3FA6NER0 549 aaPredicted RBP23.15■■□□□ 1.3
HOMER3-205ENST00000542541 A8MX80 341 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms