RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 TRIM38O00635 465 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 TRIM24O15164 1050 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 RTN3O95197 1032 aaPredicted RBP5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 PEX11BO96011 259 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 MT-CYBP00156 380 aaPredicted RBP5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 PENKP01210 267 aaPredicted RBP5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 HLA-DQB2P05538 268 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 TFAP2AP05549 437 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 THP07101 528 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 C8BP07358 591 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 AVPR1AP37288 418 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 LEPRP48357 1165 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 CD151P48509 253 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 CPT1AP50416 773 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 AFF1P51825 1210 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 KPNA2P52292 529 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 PKNOX1P55347 436 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 MRPS22P82650 360 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 SULT2A1Q06520 285 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 TNK2Q07912 1038 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 APOFQ13790 326 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 LRP8Q14114 963 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 ZNF460Q14592 562 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 PPP2R5DQ14738 602 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 POU6F1Q14863 301 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 UPP1Q16831 310 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 GRAMD1BQ3KR37 738 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 TIGD5Q53EQ6 642 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 TECRLQ5HYJ1 363 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 PRAMEF19Q5SWL8 479 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 RARS2Q5T160 578 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 RASIP1Q5U651 963 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 IRAK1BP1Q5VVH5 260 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 BTBD8Q5XKL5 378 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 C8orf82Q6P1X6 216 aaPredicted RBP5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 KDELC1Q6UW63 502 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 CD300LGQ6UXG3 332 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 TRIM67Q6ZTA4 783 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 MRPL10Q7Z7H8 261 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 LRRC49Q8IUZ0 686 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 ATPAF2Q8N5M1 289 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 BHLHE22Q8NFJ8 381 aaPredicted RBP5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 IPMKQ8NFU5 416 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 CEP70Q8NHQ1 597 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 SPPL2BQ8TCT7 592 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 USP33Q8TEY7 942 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 HEXDCQ8WVB3 486 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 ASB9Q96DX5 294 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 CCDC126Q96EE4 140 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 UBXN10Q96LJ8 280 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 LRGUKQ96M69 825 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 KLHL32Q96NJ5 620 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 RANBP9Q96S59 729 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 UHRF1Q96T88 793 aaPredicted RBP5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 GAD1Q99259 594 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 PKP2Q99959 881 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 OMDQ99983 421 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 ACBD6Q9BR61 282 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 RHOBTB2Q9BYZ6 727 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 SMOC2Q9H3U7 446 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 Q9H521 79 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 MEAF6Q9HAF1 191 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 CHST12Q9NRB3 414 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 FAM105AQ9NUU6 356 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 SAGE1Q9NXZ1 904 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 NCKIPSDQ9NZQ3 722 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 FLRT1Q9NZU1 646 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 HACD3Q9P035 362 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 SUCOQ9UBS9 1254 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 PACSIN3Q9UKS6 424 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 FBXO5Q9UKT4 447 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 PADI4Q9UM07 663 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 MAGED2Q9UNF1 606 aaPredicted RBP5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 GIT1Q9Y2X7 761 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 PCDHGA7Q9Y5G6 932 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 TIMM13Q9Y5L4 95 aaPredicted RBP5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 PTPRDP23468 1912 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 NLRC5Q86WI3 1866 aa5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 NYNRINQ9P2P1 1898 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-212ENST00000542495 ARL5CA6NH57 179 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 A8MT66 165 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 KCNU1A8MYU2 1149 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 FAM155AB1AL88 458 aaPredicted RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 TMEM233B4DJY2 109 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 STX16-NPEPL1H3BU86 382 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 M0QZQ0 153 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 DFFAO00273 331 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 FBP2O00757 339 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 VILLO15195 856 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 PAGE1O75459 146 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 RNASEH2AO75792 299 aaKnown RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 PAPSS2O95340 614 aaPredicted RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 ENO3P13929 434 aaPredicted RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 CPB1P15086 417 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 ZNF26P17031 533 aaPredicted RBP5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 PAMP19021 973 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 SAT1P21673 171 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 KCNA5P22460 613 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 PAX3P23760 479 aa5.22□□□□□ -1.57
ATPAF1-212ENST00000542495 VARSP26640 1264 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms