RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 RPL10LQ96L21 214 aaKnown RBP17.33■□□□□ 0.37
TMEM50B-210ENST00000542230 EBF4Q9BQW3 602 aa17.33■□□□□ 0.37
TMEM50B-210ENST00000542230 FAM167BQ9BTA0 163 aa17.33■□□□□ 0.37
TMEM50B-210ENST00000542230 MAN1C1Q9NR34 630 aa17.33■□□□□ 0.37
TMEM50B-210ENST00000542230 PNPOQ9NVS9 261 aa17.33■□□□□ 0.37
TMEM50B-210ENST00000542230 INTS6Q9UL03 887 aaKnown RBP17.33■□□□□ 0.37
TMEM50B-210ENST00000542230 MAFFQ9ULX9 164 aa17.33■□□□□ 0.37
TMEM50B-210ENST00000542230 TRAV19A0A0A6YYK7 116 aa17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 T-ENOLP0DO92 83 aa17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 RALBP11234 206 aa17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 SP100P23497 879 aaPredicted RBP17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 TARSP26639 723 aaKnown RBP17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 CTSOP43234 321 aaPredicted RBP17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 LEPRP48357 1165 aaKnown RBP17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 CDKN1CP49918 316 aaPredicted RBP17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 CDKN2DP55273 166 aa17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 KCNJ2P63252 427 aa17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 UGP2Q16851 508 aa17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 GPR158Q5T848 1215 aa17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 PIM3Q86V86 326 aa17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 FSTL5Q8N475 847 aaPredicted RBP17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 SGF29Q96ES7 293 aa17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 TMEM237Q96Q45 408 aa17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 EMILIN2Q9BXX0 1053 aa17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 MFSD1Q9H3U5 465 aa17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 TLE6Q9H808 572 aa17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 BPIFA1Q9NP55 256 aa17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 SSX2IPQ9Y2D8 614 aa17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 IRAK3Q9Y616 596 aa17.33■□□□□ 0.36
TMEM50B-210ENST00000542230 GPR39O43194 453 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 TGDSO95455 350 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 STMN1P16949 149 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 AQP5P55064 265 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 LMAN2Q12907 356 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 RBM23Q86U06 439 aaKnown RBP17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 EFHBQ8N7U6 833 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 OR4K2Q8NGD2 314 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 ZSWIM3Q96MP5 696 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 NUDCD1Q96RS6 583 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 PLCD4Q9BRC7 762 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 RETREG1Q9H6L5 497 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 ACTR5Q9H9F9 607 aaPredicted RBP17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 THAP1Q9NVV9 213 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 DNAJC16Q9Y2G8 782 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 SLC7A4O43246 635 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 IL1BP01584 269 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 RFTN1Q14699 578 aaPredicted RBP17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 CBX2Q14781 532 aaPredicted RBP17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 FAM219BQ5XKK7 198 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 TMEM207Q6UWW9 146 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 TBC1D1Q86TI0 1168 aaPredicted RBP17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 CAMK1DQ8IU85 385 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 ELMOD1Q8N336 334 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 ST13P5Q8NFI4 369 aaPredicted RBP17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 AGR3Q8TD06 166 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 ANKRD49Q8WVL7 239 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 HERVK_113Q902F9 699 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 MCOLN1Q9GZU1 580 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 LINC00597Q9H2U6 94 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 HAO1Q9UJM8 370 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 LSM7Q9UK45 103 aaKnown RBP17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 ACOT9Q9Y305 439 aa17.32■□□□□ 0.36
TMEM50B-210ENST00000542230 H0YHG0 523 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 LATS1O95835 1130 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 STK19P49842 368 aaPredicted RBP17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 RHOAP61586 193 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 ACVR1Q04771 509 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 SLC12A1Q13621 1099 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 CCDC153Q494R4 210 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 ASTLQ6HA08 431 aaPredicted RBP17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 ZNF549Q6P9A3 640 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 NCEH1Q6PIU2 408 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 MAVSQ7Z434 540 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 TMEM25Q86YD3 366 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 TRIM42Q8IWZ5 723 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 OR6Y1Q8NGX8 325 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 HEXDCQ8WVB3 486 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 CDKN2AIPNLQ96HQ2 116 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 SCYL1Q96KG9 808 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 TNKS2Q9H2K2 1166 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 CERS4Q9HA82 394 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 ARMCX1Q9P291 453 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 PCDHB9Q9Y5E1 797 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 CARNS1A5YM72 827 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 NEMP2A6NFY4 417 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 SERPINE1P05121 402 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 RHOP08100 348 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 CDC25CP30307 473 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 ZNF140P52738 457 aaPredicted RBP17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 TIAL1Q01085 375 aaKnown RBP eCLIP17.31■□□□□ 0.361e-8■■■□□ 16.7
TMEM50B-210ENST00000542230 CTC1Q2NKJ3 1217 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 PSRC1Q6PGN9 363 aaPredicted RBP17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 CLNKQ7Z7G1 428 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 CRLF3Q8IUI8 442 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 NAT14Q8WUY8 206 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 USP13Q92995 863 aaPredicted RBP17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 FAM96AQ9H5X1 160 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 XPR1Q9UBH6 696 aa17.31■□□□□ 0.36
TMEM50B-210ENST00000542230 ANKRD66B4E2M5 251 aa17.3■□□□□ 0.36
TMEM50B-210ENST00000542230 TRIM24O15164 1050 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms