RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 MOB3CQ70IA8 216 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 MON1BQ7L1V2 547 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 GET4Q7L5D6 327 aaPredicted RBP3.37□□□□□ -1.87
USP28-210ENST00000542033 RRM2BQ7LG56 351 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 ZNF367Q7RTV3 350 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 PXKQ7Z7A4 578 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 PATL1Q86TB9 770 aaKnown RBP3.37□□□□□ -1.87
USP28-210ENST00000542033 FAM160B2Q86V87 743 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 LURAP1LQ8IV03 231 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 CCDC105Q8IYK2 499 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 TMEM163Q8TC26 289 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 METTL6Q8TCB7 284 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 OTULINQ96BN8 352 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 ELP4Q96EB1 424 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 KIF1BPQ96EK5 621 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 LYZL4Q96KX0 146 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 APOLD1Q96LR9 279 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 CENPOQ9BU64 300 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 TEX13AQ9BXU3 409 aaPredicted RBP3.37□□□□□ -1.87
USP28-210ENST00000542033 SLC25A18Q9H1K4 315 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 TTYH1Q9H313 450 aaPredicted RBP3.37□□□□□ -1.87
USP28-210ENST00000542033 MUC13Q9H3R2 512 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 PLSCR4Q9NRQ2 329 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 SPATS2LQ9NUQ6 558 aaKnown RBP3.37□□□□□ -1.87
USP28-210ENST00000542033 PLK2Q9NYY3 685 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 HCN3Q9P1Z3 774 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 NOL7Q9UMY1 257 aaKnown RBP3.37□□□□□ -1.87
USP28-210ENST00000542033 CAMK2AQ9UQM7 478 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 RPGRIP1LQ68CZ1 1315 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 ZBED9Q6R2W3 1325 aa3.37□□□□□ -1.87
USP28-210ENST00000542033 RSF1Q96T23 1441 aaPredicted RBP3.36□□□□□ -1.87
USP28-210ENST00000542033 BICDL2A1A5D9 508 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 BECN2A8MW95 431 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 KDM4EB2RXH2 506 aaPredicted RBP3.36□□□□□ -1.87
USP28-210ENST00000542033 CHL1O00533 1208 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 ASAP2O43150 1006 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 SPRY3O43610 288 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 ITM2AO43736 263 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 MLYCDO95822 493 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 URODP06132 367 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 VDRP11473 427 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 PCNAP12004 261 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 AKR1B1P15121 316 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 PTPN2P17706 415 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 POU1F1P28069 291 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 TKTP29401 623 aaKnown RBP3.36□□□□□ -1.87
USP28-210ENST00000542033 CASQ1P31415 396 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 FMO4P31512 558 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 BSGP35613 385 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 CDKN2AP42771 156 aaKnown RBP3.36□□□□□ -1.87
USP28-210ENST00000542033 MAGEA8P43361 318 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 CENPAP49450 140 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 GTF2A1P52655 376 aaPredicted RBP3.36□□□□□ -1.87
USP28-210ENST00000542033 LINC00205P59089 165 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 CAPSQ13938 189 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 VEPH1Q14D04 833 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 PLEKHO1Q53GL0 409 aaPredicted RBP3.36□□□□□ -1.87
USP28-210ENST00000542033 DCAF6Q58WW2 860 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 ZNF667Q5HYK9 610 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 C1QTNF12Q5T7M4 302 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 CES5AQ6NT32 575 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 Q6ZSV7 163 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 KRT74Q7RTS7 529 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 TADA2BQ86TJ2 420 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 GPAT4Q86UL3 456 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 DENND6AQ8IWF6 608 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 RBFAQ8N0V3 343 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 TEX45Q8NA69 505 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 MIGA1Q8NAN2 632 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 C11orf65Q8NCR3 313 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 OIT3Q8WWZ8 545 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 SAAL1Q96ER3 474 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 URB1-AS1Q96HZ7 61 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 CFAP53Q96M91 514 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 YME1L1Q96TA2 773 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 AP1M1Q9BXS5 423 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 ITPAQ9BY32 194 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 DCLK3Q9C098 648 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 NPFFR1Q9GZQ6 430 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 CDT1Q9H211 546 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 MVB12BQ9H7P6 319 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 BRF2Q9HAW0 419 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 KCND2Q9NZV8 630 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 CGNQ9P2M7 1197 aaKnown RBP3.36□□□□□ -1.87
USP28-210ENST00000542033 IL36RNQ9UBH0 155 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 SARDHQ9UL12 918 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 MYO6Q9UM54 1294 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 SNX8Q9Y5X2 465 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 PTGDR2Q9Y5Y4 395 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 LYVE1Q9Y5Y7 322 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 PSAT1Q9Y617 370 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 PASKQ96RG2 1323 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 KDM3AQ9Y4C1 1321 aa3.36□□□□□ -1.87
USP28-210ENST00000542033 TEX13CA0A0J9YWL9 993 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 A0A1B0GVT2 93 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 I6L893 689 aaPredicted RBP3.35□□□□□ -1.87
USP28-210ENST00000542033 EBAG9O00559 213 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 RGS14O43566 566 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 LDB2O43679 373 aa3.35□□□□□ -1.87
USP28-210ENST00000542033 ATP2C2O75185 946 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms