RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 ARSDP51689 593 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 CSHL1Q14406 222 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 FAM26DQ5JW98 314 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 TWF2Q6IBS0 349 aaKnown RBP9.59□□□□□ -0.87
CNOT4-212ENST00000541284 FAM45BPQ6NSW5 357 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 NEPROQ6NW34 567 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 GALNT7Q86SF2 657 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 IFNL1Q8IU54 200 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 GALNT4Q8N4A0 578 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 ATPAF2Q8N5M1 289 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 FAM45AQ8TCE6 357 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 PTERQ96BW5 349 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 MPP4Q96JB8 637 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 PRPF18Q99633 342 aaKnown RBP9.59□□□□□ -0.87
CNOT4-212ENST00000541284 SMOC2Q9H3U7 446 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 TRPC7Q9HCX4 862 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 ENTPD7Q9NQZ7 604 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 FAM105AQ9NUU6 356 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 OLAHQ9NV23 265 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 MARCH4Q9P2E8 410 aaPredicted RBP9.59□□□□□ -0.87
CNOT4-212ENST00000541284 WASH4PA8MWX3 477 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 PMPCBO75439 489 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 PENKP01210 267 aaPredicted RBP9.59□□□□□ -0.87
CNOT4-212ENST00000541284 CYP2C18P33260 490 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 GEMP55040 296 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 COG7P83436 770 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 TRAP1Q12931 704 aaKnown RBP9.59□□□□□ -0.87
CNOT4-212ENST00000541284 ART3Q13508 389 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 MTX3Q5HYI7 312 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 IYDQ6PHW0 289 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 HACD2Q6Y1H2 254 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 KIAA0408Q6ZU52 694 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 AMIGO2Q86SJ2 522 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 ALDH16A1Q8IZ83 802 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 L3HYPDHQ96EM0 354 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 SLC10A4Q96EP9 437 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 IMP4Q96G21 291 aaKnown RBP9.59□□□□□ -0.87
CNOT4-212ENST00000541284 ZFRQ96KR1 1074 aaKnown RBP9.59□□□□□ -0.87
CNOT4-212ENST00000541284 NMUR1Q9HB89 426 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 VCX3AQ9NNX9 186 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 MAP10Q9P2G4 905 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 CNOT6Q9ULM6 557 aaKnown RBP9.59□□□□□ -0.87
CNOT4-212ENST00000541284 PHF24Q9UPV7 400 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 HS3ST4Q9Y661 456 aa9.59□□□□□ -0.87
CNOT4-212ENST00000541284 TRIM64CA6NLI5 447 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 F8W810 466 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 FXYD1O00168 92 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 ATP6V1B2P21281 511 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 SCNN1GP51170 649 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 EMP3P54852 163 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 WNT3AP56704 352 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 NRG1Q02297 640 aaPredicted RBP9.58□□□□□ -0.88
CNOT4-212ENST00000541284 DSC3Q14574 896 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 UNC50Q53HI1 259 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 NHSL2Q5HYW2 709 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 RWDD4Q6NW29 188 aaKnown RBP9.58□□□□□ -0.88
CNOT4-212ENST00000541284 ZNF549Q6P9A3 640 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 ISCA2Q86U28 154 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 FCRL2Q96LA5 508 aaPredicted RBP9.58□□□□□ -0.88
CNOT4-212ENST00000541284 CHST12Q9NRB3 414 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 SFMBT1Q9UHJ3 866 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 KIF26AQ9ULI4 1882 aaPredicted RBP9.58□□□□□ -0.88
CNOT4-212ENST00000541284 TRIM64A6NGJ6 449 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 CASTOR2A6NHX0 329 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 PPP6CO00743 305 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 FAM58BPP0C7Q3 252 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 CDH2P19022 906 aaPredicted RBP9.58□□□□□ -0.88
CNOT4-212ENST00000541284 ZFP36L2P47974 494 aaKnown RBP9.58□□□□□ -0.88
CNOT4-212ENST00000541284 PLK1P53350 603 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 TNK2Q07912 1038 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 PDAP1Q13442 181 aaKnown RBP9.58□□□□□ -0.88
CNOT4-212ENST00000541284 FASTKQ14296 549 aaKnown RBP9.58□□□□□ -0.88
CNOT4-212ENST00000541284 BRMS1LQ5PSV4 323 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 ZNF678Q5SXM1 525 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 PIK3R6Q5UE93 754 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 CLEC6AQ6EIG7 209 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 MRPL10Q7Z7H8 261 aaKnown RBP9.58□□□□□ -0.88
CNOT4-212ENST00000541284 PIM3Q86V86 326 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 CILP2Q8IUL8 1156 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 EPHX4Q8IUS5 362 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 SLC39A3Q9BRY0 314 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 SIK2Q9H0K1 926 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 SEMA6AQ9H2E6 1030 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 VPS45Q9NRW7 570 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 RBM22Q9NW64 420 aaKnown RBP eCLIP9.58□□□□□ -0.881e-7■■■■■ 31.6
CNOT4-212ENST00000541284 GTSE1Q9NYZ3 720 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 ABCD2Q9UBJ2 740 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 AP4S1Q9Y587 144 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 ALPK3Q96L96 1907 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 A0A1B0GTL3 188 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 MYADML2A6NDP7 307 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 PSMD12O00232 456 aaPredicted RBP9.58□□□□□ -0.88
CNOT4-212ENST00000541284 FGF10O15520 208 aaPredicted RBP9.58□□□□□ -0.88
CNOT4-212ENST00000541284 MGEA5O60502 916 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 CSPG5O95196 566 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 S1PR4O95977 384 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 ITGB1P05556 798 aa9.58□□□□□ -0.88
CNOT4-212ENST00000541284 LTA4HP09960 611 aaKnown RBP9.58□□□□□ -0.88
CNOT4-212ENST00000541284 ATXN1LP0C7T5 689 aaKnown RBP9.58□□□□□ -0.88
CNOT4-212ENST00000541284 SLC7A1P30825 629 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms