RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 SNX7Q9UNH6 387 aa15.02□□□□□ -0.01
SMARCA4-207ENST00000541122 BTRCQ9Y297 605 aa15.02□□□□□ -0.01
SMARCA4-207ENST00000541122 STXBP5LQ9Y2K9 1186 aa15.02□□□□□ -0.01
SMARCA4-207ENST00000541122 ARHGAP23Q9P227 1491 aa15.02□□□□□ -0.01
SMARCA4-207ENST00000541122 FADS2O95864 444 aaKnown RBP15.02□□□□□ -0.01
SMARCA4-207ENST00000541122 TYMPP19971 482 aa15.02□□□□□ -0.01
SMARCA4-207ENST00000541122 MTHFRP42898 656 aa15.02□□□□□ -0.01
SMARCA4-207ENST00000541122 COPZ1P61923 177 aa15.02□□□□□ -0.01
SMARCA4-207ENST00000541122 MED22Q15528 200 aa15.02□□□□□ -0.01
SMARCA4-207ENST00000541122 CXXC5Q7LFL8 322 aaKnown RBP15.02□□□□□ -0.01
SMARCA4-207ENST00000541122 DQX1Q8TE96 717 aaKnown RBP15.02□□□□□ -0.01
SMARCA4-207ENST00000541122 ZCCHC2Q9C0B9 1178 aaKnown RBP15.02□□□□□ -0.01
SMARCA4-207ENST00000541122 PCDH18Q9HCL0 1135 aa15.02□□□□□ -0.01
SMARCA4-207ENST00000541122 PCDHGC3Q9UN70 934 aa15.02□□□□□ -0.01
SMARCA4-207ENST00000541122 FAM50BQ9Y247 325 aa15.02□□□□□ -0.01
SMARCA4-207ENST00000541122 TCRBV7S2A1N4TA0A589 114 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 MEIS2O14770 477 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 DHX15O43143 795 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 CSDE1O75534 798 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 DARSP14868 501 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 ITGAXP20702 1163 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 ALDH9A1P49189 494 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 REP15Q6BDI9 236 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 KCTD8Q6ZWB6 473 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 PTCD2Q8WV60 388 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 KIFC1Q9BW19 673 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 EHD1Q9H4M9 534 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 ATP13A1Q9HD20 1204 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 MEGF6O75095 1541 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 OR6B1O95007 311 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 IDH3AP50213 366 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 CDK18Q07002 472 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 ARSHQ5FYA8 562 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 C16orf62Q7Z3J2 963 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 SERAC1Q96JX3 654 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 DEFB129Q9H1M3 183 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 PFDN2Q9UHV9 154 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 ADGRE2Q9UHX3 823 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 DIP2CQ9Y2E4 1556 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 AGLP35573 1532 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 SGTAO43765 313 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 IPO13O94829 963 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 IGFBP5P24593 272 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 HOXD10P28358 340 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 SDC2P34741 201 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 CDKN2BP42772 138 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 GMFBP60983 142 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 GNA13Q14344 377 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 ZBED5Q49AG3 693 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 TIGD2Q4W5G0 525 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 PRR23BQ6ZRT6 265 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 TFAP2DQ7Z6R9 452 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 ARMC8Q8IUR7 673 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 ATL1Q8WXF7 558 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 FCGR1BQ92637 280 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 UBE2E3Q969T4 207 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 MED8Q96G25 268 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 TEFMQ96QE5 360 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 ULBP1Q9BZM6 244 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 ABCC13Q9NSE7 274 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 PDE10AQ9Y233 779 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 TNFSF13BQ9Y275 285 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 PXDNQ92626 1479 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 CLTCQ00610 1675 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 FAM240BA0A1B0GVZ2 78 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 PRMT5O14744 637 aaPredicted RBP15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 LYPLA2O95372 231 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 ANGPTL1O95841 491 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 ITGB6P18564 788 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 KLHDC10Q6PID8 442 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 MON1BQ7L1V2 547 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 PHF11Q9UIL8 331 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 VPS4AQ9UN37 437 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 VWA7Q9Y334 891 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 DGKBQ9Y6T7 804 aa15.01□□□□□ -0.01
SMARCA4-207ENST00000541122 PAPSS1O43252 624 aaPredicted RBP15□□□□□ -0.01
SMARCA4-207ENST00000541122 SUV39H1O43463 412 aa15□□□□□ -0.01
SMARCA4-207ENST00000541122 ECDO95905 644 aaPredicted RBP15□□□□□ -0.01
SMARCA4-207ENST00000541122 CALCAP01258 141 aa15□□□□□ -0.01
SMARCA4-207ENST00000541122 PUDPQ08623 228 aa15□□□□□ -0.01
SMARCA4-207ENST00000541122 EIF2B5Q13144 721 aaKnown RBP15□□□□□ -0.01
SMARCA4-207ENST00000541122 ZNF280DQ6N043 979 aa15□□□□□ -0.01
SMARCA4-207ENST00000541122 ENDOVQ8N8Q3 282 aaKnown RBP15□□□□□ -0.01
SMARCA4-207ENST00000541122 TRPV1Q8NER1 839 aa15□□□□□ -0.01
SMARCA4-207ENST00000541122 LRTOMTQ8WZ04 291 aa15□□□□□ -0.01
SMARCA4-207ENST00000541122 NLNQ9BYT8 704 aa15□□□□□ -0.01
SMARCA4-207ENST00000541122 KAT8Q9H7Z6 458 aaKnown RBP15□□□□□ -0.01
SMARCA4-207ENST00000541122 TOR4AQ9NXH8 423 aa15□□□□□ -0.01
SMARCA4-207ENST00000541122 ARHGEF28Q8N1W1 1705 aaKnown RBP15□□□□□ -0.01
SMARCA4-207ENST00000541122 NKRFO15226 690 aaKnown RBP eCLIP15□□□□□ -0.01
SMARCA4-207ENST00000541122 MBL2P11226 248 aaPredicted RBP15□□□□□ -0.01
SMARCA4-207ENST00000541122 LIMK2P53671 638 aa15□□□□□ -0.01
SMARCA4-207ENST00000541122 RALGDSQ12967 914 aa15□□□□□ -0.01
SMARCA4-207ENST00000541122 STARD3Q14849 445 aa15□□□□□ -0.01
SMARCA4-207ENST00000541122 ASTE1Q2TB18 679 aaPredicted RBP15□□□□□ -0.01
SMARCA4-207ENST00000541122 ARMC6Q6NXE6 501 aa15□□□□□ -0.01
SMARCA4-207ENST00000541122 SLC7A5P2Q9GIP4 190 aa15□□□□□ -0.01
SMARCA4-207ENST00000541122 SLC7A8Q9UHI5 535 aa15□□□□□ -0.01
SMARCA4-207ENST00000541122 GUCY1B2O75343 617 aa15□□□□□ -0.01
SMARCA4-207ENST00000541122 MSX2P35548 267 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms