RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ZNF512Q96ME7 567 aaPredicted RBP12.35□□□□□ -0.43
NPC1-202ENST00000540608 TRMOQ9BU70 441 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 RBM22Q9NW64 420 aaKnown RBP eCLIP12.35□□□□□ -0.43
NPC1-202ENST00000540608 SLC45A1Q9Y2W3 748 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 STAMBPO95630 424 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 HLA-DQB2P05538 268 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 CRYBB1P53674 252 aaPredicted RBP12.35□□□□□ -0.43
NPC1-202ENST00000540608 PRKCQQ04759 706 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 EIF4EBP2Q13542 120 aaPredicted RBP12.35□□□□□ -0.43
NPC1-202ENST00000540608 DCTN2Q13561 401 aaKnown RBP12.35□□□□□ -0.43
NPC1-202ENST00000540608 SEPT6Q14141 434 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 ZNF789Q5FWF6 425 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 LAYNQ6UX15 382 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 TLK2Q86UE8 772 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 GRIN3AQ8TCU5 1115 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 TRPC4APQ8TEL6 797 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 TMIGD2Q96BF3 282 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 ROPN1LQ96C74 230 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 PHF21BQ96EK2 531 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 RMND5BQ96G75 393 aaPredicted RBP12.35□□□□□ -0.43
NPC1-202ENST00000540608 RHOBTB2Q9BYZ6 727 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 GSTO2Q9H4Y5 243 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 DUS2Q9NX74 493 aaKnown RBP12.35□□□□□ -0.43
NPC1-202ENST00000540608 SLC8A2Q9UPR5 921 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 MTF2Q9Y483 593 aaPredicted RBP12.35□□□□□ -0.43
NPC1-202ENST00000540608 GMEB1Q9Y692 573 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 TLL2Q9Y6L7 1015 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 UBFD1O14562 309 aaKnown RBP12.35□□□□□ -0.43
NPC1-202ENST00000540608 FGF10O15520 208 aaPredicted RBP12.35□□□□□ -0.43
NPC1-202ENST00000540608 IGLV3-25P01717 112 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 HOXC13P31276 330 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 AFF1P51825 1210 aaKnown RBP12.35□□□□□ -0.43
NPC1-202ENST00000540608 PLK1P53350 603 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 TWF2Q6IBS0 349 aaKnown RBP12.35□□□□□ -0.43
NPC1-202ENST00000540608 TIGD7Q6NT04 549 aaPredicted RBP12.35□□□□□ -0.43
NPC1-202ENST00000540608 KDELC2Q7Z4H8 507 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 OR2T34Q8NGX1 318 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 OR2T3Q8NH03 318 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 GABPB2Q8TAK5 448 aaPredicted RBP12.35□□□□□ -0.43
NPC1-202ENST00000540608 TFAP2CQ92754 450 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 ZUFSPQ96AP4 578 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 PPWD1Q96BP3 646 aaKnown RBP12.35□□□□□ -0.43
NPC1-202ENST00000540608 UPF3AQ9H1J1 476 aaKnown RBP12.35□□□□□ -0.43
NPC1-202ENST00000540608 ATXN3LQ9H3M9 355 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 CATSPERBQ9H7T0 1116 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 CLK4Q9HAZ1 481 aaKnown RBP12.35□□□□□ -0.43
NPC1-202ENST00000540608 SLC38A7Q9NVC3 462 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 TBC1D13Q9NVG8 400 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 MYLKQ15746 1914 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 TIPRLO75663 272 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 BMP10O95393 424 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 CKMT2P17540 419 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 YWHAQP27348 245 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 HTR7P34969 479 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 PSEN2P49810 448 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 SLC7A2P52569 658 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 EMP3P54852 163 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 EML3Q32P44 896 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 CYHR1Q6ZMK1 362 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 ERMP1Q7Z2K6 904 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 ANKRD23Q86SG2 305 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 FUNDC1Q8IVP5 155 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 PCYOX1LQ8NBM8 494 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 OR9I1Q8NGQ6 314 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 GFM2Q969S9 779 aaKnown RBP12.34□□□□□ -0.43
NPC1-202ENST00000540608 ARNT2Q9HBZ2 717 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 FLRT1Q9NZU1 646 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 VWA7Q9Y334 891 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 ZNF839A8K0R7 811 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 PLOD2O00469 737 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 NELFEP18615 380 aaKnown RBP12.34□□□□□ -0.43
NPC1-202ENST00000540608 GPX3P22352 226 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 NDST2P52849 883 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 BEX3Q00994 111 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 HECTD2Q5U5R9 776 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 BEND5Q7L4P6 421 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 LPCAT2Q7L5N7 544 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 SPNS2Q8IVW8 549 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 SCML4Q8N228 414 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 PACRGLQ8N7B6 248 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 SNX31Q8N9S9 440 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 ANKRD49Q8WVL7 239 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 CANT1Q8WVQ1 401 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 L3HYPDHQ96EM0 354 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 TCF12Q99081 682 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 PTPN18Q99952 460 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 GPATCH1Q9BRR8 931 aaKnown RBP12.34□□□□□ -0.43
NPC1-202ENST00000540608 CCM2LQ9NUG4 571 aaPredicted RBP12.34□□□□□ -0.43
NPC1-202ENST00000540608 IRAK4Q9NWZ3 460 aa12.34□□□□□ -0.43
NPC1-202ENST00000540608 COL4A4P53420 1690 aaPredicted RBP12.34□□□□□ -0.43
NPC1-202ENST00000540608 A0A0J9YVX5 310 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 BBIP1A8MTZ0 92 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 SOCS2O14508 198 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 CLCNKBP51801 687 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 WNT3AP56704 352 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 STX1BP61266 288 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 MYBPC3Q14896 1274 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 MAP7D1Q3KQU3 841 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 BRMS1LQ5PSV4 323 aa12.33□□□□□ -0.44
NPC1-202ENST00000540608 ZNF678Q5SXM1 525 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms