RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 XRCC5P13010 732 aaKnown RBP9.51□□□□□ -0.89
CLIP1-214ENST00000540539 NPR3P17342 541 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 IL12AP29459 219 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 PRKAR1BP31321 381 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 UGT2B10P36537 528 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 RGS7P49802 495 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 TEKQ02763 1124 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 SLC10A2Q12908 348 aaPredicted RBP9.51□□□□□ -0.89
CLIP1-214ENST00000540539 POLD3Q15054 466 aaPredicted RBP9.51□□□□□ -0.89
CLIP1-214ENST00000540539 PCBP1Q15365 356 aaKnown RBP eCLIP9.51□□□□□ -0.89
CLIP1-214ENST00000540539 DDR2Q16832 855 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 GEN1Q17RS7 908 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 PRSS42Q7Z5A4 293 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 LINC00523Q86TU6 105 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 FAM124AQ86V42 546 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 ARHGEF19Q8IW93 802 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 PHC2Q8IXK0 858 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 LCORLQ8N3X6 602 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 CBR4Q8N4T8 237 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 AGBL3Q8NEM8 1001 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 NDNFQ8TB73 568 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 SLC20A1Q8WUM9 679 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 RSAD2Q8WXG1 361 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 B3GALT6Q96L58 329 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 HSFY1Q96LI6 401 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 TEKT5Q96M29 485 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 PNMA5Q96PV4 448 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 LENG8Q96PV6 779 aaPredicted RBP9.51□□□□□ -0.89
CLIP1-214ENST00000540539 UHRF1Q96T88 793 aaPredicted RBP9.51□□□□□ -0.89
CLIP1-214ENST00000540539 C12orf57Q99622 126 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 WDR83Q9BRX9 315 aaKnown RBP9.51□□□□□ -0.89
CLIP1-214ENST00000540539 DSN1Q9H410 356 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 FBXL12Q9NXK8 326 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 MAD2L2Q9UI95 211 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 MAPRE3Q9UPY8 281 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 ADAMTSL1Q8N6G6 1762 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 SEC24AO95486 1093 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 IL7P13232 177 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 OSBPP22059 807 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 CALML3P27482 149 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 DYNLL1P63167 89 aaKnown RBP9.51□□□□□ -0.89
CLIP1-214ENST00000540539 FPGSQ05932 587 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 RIN1Q13671 783 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 LETMD1Q6P1Q0 360 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 ADCK1Q86TW2 530 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 NLGN4XQ8N0W4 816 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 METTL4Q8N3J2 472 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 ANKFN1Q8N957 763 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 SLC7A14Q8TBB6 771 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 PROX1Q92786 737 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 LPPQ93052 612 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 BDH2Q9BUT1 245 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 B3GNT2Q9NY97 397 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 SFMBT1Q9UHJ3 866 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 CNOT6Q9ULM6 557 aaKnown RBP9.51□□□□□ -0.89
CLIP1-214ENST00000540539 DAGLAQ9Y4D2 1042 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 GMPPBQ9Y5P6 360 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 PSAT1Q9Y617 370 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 UBE4BO95155 1302 aa9.51□□□□□ -0.89
CLIP1-214ENST00000540539 CAPN5O15484 640 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-214ENST00000540539 PROS1P07225 676 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 AKR1B1P15121 316 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 ZNF3P17036 446 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 PTX3P26022 381 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-214ENST00000540539 HOXA7P31268 230 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-214ENST00000540539 SOX11P35716 441 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 PRIM2P49643 509 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 MNX1P50219 401 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-214ENST00000540539 GAD2Q05329 585 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 TROAPQ12815 778 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 MORF4L2Q15014 288 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 UGP2Q16851 508 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 TMEM81Q6P7N7 255 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 BRAT1Q6PJG6 821 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 HHIPL2Q6UWX4 724 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 CFAP77Q6ZQR2 320 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 ZNF767PQ75MW2 155 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 FRMD5Q7Z6J6 570 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 EPHX4Q8IUS5 362 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 MCUQ8NE86 351 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 ZNF564Q8TBZ8 553 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-214ENST00000540539 URGCPQ8TCY9 931 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 SYTL5Q8TDW5 730 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-214ENST00000540539 PHF10Q8WUB8 498 aaKnown RBP9.5□□□□□ -0.89
CLIP1-214ENST00000540539 FYTTD1Q96QD9 318 aaKnown RBP9.5□□□□□ -0.89
CLIP1-214ENST00000540539 MRIQ9BWK5 157 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 OR51B5Q9H339 312 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 MRM3Q9HC36 420 aaKnown RBP9.5□□□□□ -0.89
CLIP1-214ENST00000540539 FBXO5Q9UKT4 447 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 PRR12Q9ULL5 1215 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 BAZ2AQ9UIF9 1905 aaKnown RBP9.5□□□□□ -0.89
CLIP1-214ENST00000540539 M0R2N6 131 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 M0R3G1 203 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 BTN3A1O00481 513 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 SLC4A1P02730 911 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 BPGMP07738 259 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 USP17L8P0C7I0 530 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 ETS1P14921 441 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 GLDCP23378 1020 aa9.5□□□□□ -0.89
CLIP1-214ENST00000540539 GARSP41250 739 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms