RNA–Protein interactions for RNA: ENST00000540162.5

MRPL48-209, Transcript of mitochondrial ribosomal protein L48, human

TSL 5

Gene MRPL48, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL48-209	ENST00000540162	MTM1	Q13496	603 aa		11.64	□□□□□ -0.55
MRPL48-209	ENST00000540162	AGER	Q15109	404 aa		11.64	□□□□□ -0.55
MRPL48-209	ENST00000540162	MAN2A1	Q16706	1144 aa		11.64	□□□□□ -0.55
MRPL48-209	ENST00000540162	SPECC1L	Q69YQ0	1117 aa		11.64	□□□□□ -0.55
MRPL48-209	ENST00000540162	PIM3	Q86V86	326 aa		11.64	□□□□□ -0.55
MRPL48-209	ENST00000540162	ZSWIM9	Q86XI8	627 aa		11.64	□□□□□ -0.55
MRPL48-209	ENST00000540162	RTL3	Q8N8U3	475 aa	Known RBP	11.64	□□□□□ -0.55
MRPL48-209	ENST00000540162	CENPI	Q92674	756 aa	Predicted RBP	11.64	□□□□□ -0.55
MRPL48-209	ENST00000540162	NKD1	Q969G9	470 aa		11.64	□□□□□ -0.55
MRPL48-209	ENST00000540162	LGR4	Q9BXB1	951 aa		11.64	□□□□□ -0.55
MRPL48-209	ENST00000540162	NAA15	Q9BXJ9	866 aa	Known RBP	11.64	□□□□□ -0.55
MRPL48-209	ENST00000540162	SLC12A9	Q9BXP2	914 aa		11.64	□□□□□ -0.55
MRPL48-209	ENST00000540162	CYP4F12	Q9HCS2	524 aa		11.64	□□□□□ -0.55
MRPL48-209	ENST00000540162	ANKMY1	Q9P2S6	941 aa		11.64	□□□□□ -0.55
MRPL48-209	ENST00000540162	MOSPD1	Q9UJG1	213 aa		11.64	□□□□□ -0.55
MRPL48-209	ENST00000540162	TRPM6	Q9BX84	2022 aa		11.64	□□□□□ -0.55
MRPL48-209	ENST00000540162	TSPAN11	A1L157	253 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	RECQL5	O94762	991 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	CPNE6	O95741	557 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	FGF3	P11487	239 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	PRKCSH	P14314	528 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	MMP8	P22894	467 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	PTPN9	P43378	593 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	ARSD	P51689	593 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	YBEY	P58557	167 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	SERINC3	Q13530	473 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	UBAP2L	Q14157	1087 aa	Known RBP	11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	IGFBP7	Q16270	282 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	CAMK4	Q16566	473 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	TPD52L1	Q16890	204 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	SKIDA1	Q1XH10	827 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	MAP9	Q49MG5	647 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	CFAP58	Q5T655	872 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	BORA	Q6PGQ7	559 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	STRADA	Q7RTN6	431 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	SLFN11	Q7Z7L1	901 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	CAMK1D	Q8IU85	385 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	RCBTB1	Q8NDN9	531 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	SLC30A5	Q8TAD4	765 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	ZNF564	Q8TBZ8	553 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	FAM172A	Q8WUF8	416 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	SLC20A1	Q8WUM9	679 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	PMEPA1	Q969W9	287 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	ZNF641	Q96N77	438 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	B3GNT4	Q9C0J1	378 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	AKAP7	Q9P0M2	348 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	KIAA1468	Q9P260	1216 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	ATP8A1	Q9Y2Q0	1164 aa		11.63	□□□□□ -0.55
MRPL48-209	ENST00000540162	IGHV5-10-1	A0A0J9YXX1	117 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162		A8MX80	341 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	STMND1	H3BQB6	276 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162		J3KR12	359 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	TNFRSF10C	O14798	259 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	TEX33	O43247	280 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	CREB3	O43889	395 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	CYP1A1	P04798	512 aa	Predicted RBP	11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	HOXC4	P09017	264 aa	Predicted RBP	11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	KRT3	P12035	628 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	UCHL3	P15374	230 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	KEL	P23276	732 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	CD1C	P29017	333 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	RFC1	P35251	1148 aa	Predicted RBP	11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	MMP12	P39900	470 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	MAZ	P56270	477 aa	Known RBP	11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	POLE2	P56282	527 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	KIAA1024L	P59773	190 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	KCNAB2	Q13303	367 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	PARP15	Q460N3	678 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	HSP90AA4P	Q58FG1	418 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	EFHC2	Q5JST6	749 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	MIIP	Q5JXC2	388 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	SCYL2	Q6P3W7	929 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	BRAT1	Q6PJG6	821 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	DNAAF5	Q86Y56	855 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	EPS8L1	Q8TE68	723 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	NTAN1	Q96AB6	310 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	TAAR9	Q96RI9	348 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	NUDT22	Q9BRQ3	303 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	C11orf70	Q9BRQ4	267 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	TUBGCP2	Q9BSJ2	902 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	STK33	Q9BYT3	514 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	EPN3	Q9H201	632 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	ADNP	Q9H2P0	1102 aa		11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	UBA2	Q9UBT2	640 aa	Predicted RBP	11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	NOCT	Q9UK39	431 aa	Known RBP	11.62	□□□□□ -0.55
MRPL48-209	ENST00000540162	CFAP69	A5D8W1	941 aa		11.61	□□□□□ -0.55
MRPL48-209	ENST00000540162	RHPN2P1	A8MT19	583 aa		11.61	□□□□□ -0.55
MRPL48-209	ENST00000540162		F8VZ95	297 aa		11.61	□□□□□ -0.55
MRPL48-209	ENST00000540162	PES1	O00541	588 aa	Known RBP	11.61	□□□□□ -0.55
MRPL48-209	ENST00000540162	FGF1	P05230	155 aa		11.61	□□□□□ -0.55
MRPL48-209	ENST00000540162	LIF	P15018	202 aa		11.61	□□□□□ -0.55
MRPL48-209	ENST00000540162	CHRNB2	P17787	502 aa		11.61	□□□□□ -0.55
MRPL48-209	ENST00000540162	MPST	P25325	297 aa		11.61	□□□□□ -0.55
MRPL48-209	ENST00000540162	TRIM23	P36406	574 aa		11.61	□□□□□ -0.55
MRPL48-209	ENST00000540162	ATP1A2	P50993	1020 aa		11.61	□□□□□ -0.55
MRPL48-209	ENST00000540162	CDR2	Q01850	454 aa		11.61	□□□□□ -0.55
MRPL48-209	ENST00000540162	RALGDS	Q12967	914 aa		11.61	□□□□□ -0.55

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