RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 ALPPL2P10696 532 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 TSHRP16473 764 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 HSPA9P38646 679 aaKnown RBP16.85■□□□□ 0.29
DDB1-215ENST00000539712 MAXP61244 160 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 POLR2LP62875 67 aaKnown RBP16.85■□□□□ 0.29
DDB1-215ENST00000539712 TRAF2Q12933 501 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 KRT81Q14533 505 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 RTP5Q14D33 572 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 PAFAH1B3Q15102 231 aaKnown RBP16.85■□□□□ 0.29
DDB1-215ENST00000539712 PTPRRQ15256 657 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 ALG11Q2TAA5 492 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 PRRT3Q5FWE3 981 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 NCBP2-AS2Q69YL0 99 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 ZCCHC8Q6NZY4 707 aaKnown RBP16.85■□□□□ 0.29
DDB1-215ENST00000539712 ATPAF2Q8N5M1 289 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 PQLC3Q8N755 202 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 BTN2A2Q8WVV5 523 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 TSACCQ96A04 125 aaPredicted RBP16.85■□□□□ 0.29
DDB1-215ENST00000539712 FAF2Q96CS3 445 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 TSPY26PQ9H489 355 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 USP29Q9HBJ7 922 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 CTTNBP2NLQ9P2B4 639 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 SPASTQ9UBP0 616 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 APOBEC3BQ9UH17 382 aaKnown RBP16.85■□□□□ 0.29
DDB1-215ENST00000539712 SALL4Q9UJQ4 1053 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 CLCA2Q9UQC9 943 aa16.85■□□□□ 0.29
DDB1-215ENST00000539712 SMG1Q96Q15 3661 aaKnown RBP16.84■□□□□ 0.29
DDB1-215ENST00000539712 RP1P56715 2156 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 TMEM110-MUSTN1A8MSY1 372 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 CASC3O15234 703 aaKnown RBP16.84■□□□□ 0.29
DDB1-215ENST00000539712 YY2O15391 372 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 CBFA2T2O43439 604 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 LZTS3O60299 673 aaPredicted RBP16.84■□□□□ 0.29
DDB1-215ENST00000539712 SOCS5O75159 536 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 MT-CO3P00414 261 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 GP1BAP07359 652 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 H2AFZP0C0S5 128 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 SSR1P43307 286 aaKnown RBP16.84■□□□□ 0.29
DDB1-215ENST00000539712 HK3P52790 923 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 ADKP55263 362 aaKnown RBP16.84■□□□□ 0.29
DDB1-215ENST00000539712 PPARDQ03181 441 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 GALNT2Q10471 571 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 TRIM14Q14142 442 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 ZNF235Q14590 738 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 NFATC4Q14934 902 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 HADHQ16836 314 aaKnown RBP16.84■□□□□ 0.29
DDB1-215ENST00000539712 HS1BP3Q53T59 392 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 ANKRD20A8PQ5CZ79 823 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 FAXCQ5TGI0 409 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 MARC1Q5VT66 337 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 GUSBP11Q6P575 273 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 H2AFVQ71UI9 128 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 RNF214Q8ND24 703 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 COQ10AQ96MF6 247 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 NRSN2Q9GZP1 204 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 ABHD10Q9NUJ1 306 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 B4GALT6Q9UBX8 382 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 SHROOM3Q8TF72 1996 aa16.84■□□□□ 0.29
DDB1-215ENST00000539712 EME2A4GXA9 379 aaPredicted RBP16.83■□□□□ 0.28
DDB1-215ENST00000539712 LRP4O75096 1905 aa16.83■□□□□ 0.28
DDB1-215ENST00000539712 MFAP3LO75121 409 aa16.83■□□□□ 0.28
DDB1-215ENST00000539712 PCCBP05166 539 aa16.83■□□□□ 0.28
DDB1-215ENST00000539712 TMEM253P0C7T8 217 aa16.83■□□□□ 0.28
DDB1-215ENST00000539712 SERPINB6P35237 376 aa16.83■□□□□ 0.28
DDB1-215ENST00000539712 TRIM23P36406 574 aa16.83■□□□□ 0.28
DDB1-215ENST00000539712 GARSP41250 739 aaKnown RBP16.83■□□□□ 0.28
DDB1-215ENST00000539712 MMP13P45452 471 aa16.83■□□□□ 0.28
DDB1-215ENST00000539712 SLC10A2Q12908 348 aaPredicted RBP16.83■□□□□ 0.28
DDB1-215ENST00000539712 TBX2Q13207 712 aaPredicted RBP16.83■□□□□ 0.28
DDB1-215ENST00000539712 MTM1Q13496 603 aa16.83■□□□□ 0.28
DDB1-215ENST00000539712 CDKN3Q16667 212 aa16.83■□□□□ 0.28
DDB1-215ENST00000539712 LRRC49Q8IUZ0 686 aa16.83■□□□□ 0.28
DDB1-215ENST00000539712 SLC35F3Q8IY50 421 aa16.83■□□□□ 0.28
DDB1-215ENST00000539712 COL27A1Q8IZC6 1860 aaPredicted RBP16.83■□□□□ 0.28
DDB1-215ENST00000539712 KCTD6Q8NC69 237 aa16.83■□□□□ 0.28
DDB1-215ENST00000539712 IFI44Q8TCB0 444 aa16.83■□□□□ 0.28
DDB1-215ENST00000539712 LRRN4Q8WUT4 740 aa16.83■□□□□ 0.28
DDB1-215ENST00000539712 CTNNBL1Q8WYA6 563 aaPredicted RBP16.83■□□□□ 0.28
DDB1-215ENST00000539712 RAPGEF5Q92565 580 aa16.83■□□□□ 0.28
DDB1-215ENST00000539712 MAML1Q92585 1016 aa16.83■□□□□ 0.28
DDB1-215ENST00000539712 IL12RB2Q99665 862 aa16.83■□□□□ 0.28
DDB1-215ENST00000539712 ZNF670Q9BS34 389 aa16.83■□□□□ 0.28
DDB1-215ENST00000539712 SLC13A1Q9BZW2 595 aa16.83■□□□□ 0.28
DDB1-215ENST00000539712 SCUBE2Q9NQ36 999 aa16.83■□□□□ 0.28
DDB1-215ENST00000539712 TMEM202A6NGA9 273 aa16.82■□□□□ 0.28
DDB1-215ENST00000539712 FZD6O60353 706 aa16.82■□□□□ 0.28
DDB1-215ENST00000539712 PGLSO95336 258 aa16.82■□□□□ 0.28
DDB1-215ENST00000539712 MAP3K6O95382 1288 aa16.82■□□□□ 0.28
DDB1-215ENST00000539712 ELFN1P0C7U0 828 aa16.82■□□□□ 0.28
DDB1-215ENST00000539712 TGM2P21980 687 aa16.82■□□□□ 0.28
DDB1-215ENST00000539712 LHCGRP22888 699 aa16.82■□□□□ 0.28
DDB1-215ENST00000539712 MAN1A1P33908 653 aa16.82■□□□□ 0.28
DDB1-215ENST00000539712 GJC1P36383 396 aa16.82■□□□□ 0.28
DDB1-215ENST00000539712 DUSP3P51452 185 aaPredicted RBP16.82■□□□□ 0.28
DDB1-215ENST00000539712 SRP54P61011 504 aaKnown RBP16.82■□□□□ 0.28
DDB1-215ENST00000539712 GBE1Q04446 702 aa16.82■□□□□ 0.28
DDB1-215ENST00000539712 PDK2Q15119 407 aa16.82■□□□□ 0.28
DDB1-215ENST00000539712 CNGA3Q16281 694 aa16.82■□□□□ 0.28
DDB1-215ENST00000539712 RALGPS1Q5JS13 557 aa16.82■□□□□ 0.28
DDB1-215ENST00000539712 C6orf132Q5T0Z8 1188 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms