RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 CACNA1EQ15878 2313 aa15.83■□□□□ 0.13
RPAIN-206ENST00000539417 C4orf47A7E2U8 309 aa15.83■□□□□ 0.12
RPAIN-206ENST00000539417 PRAMEF26H0Y7S4 382 aa15.83■□□□□ 0.12
RPAIN-206ENST00000539417 HNRNPA2B1P22626 353 aaKnown RBP15.83■□□□□ 0.12
RPAIN-206ENST00000539417 CD38P28907 300 aa15.83■□□□□ 0.12
RPAIN-206ENST00000539417 CETN2P41208 172 aa15.83■□□□□ 0.12
RPAIN-206ENST00000539417 GRIA4P48058 902 aa15.83■□□□□ 0.12
RPAIN-206ENST00000539417 LMNB2Q03252 620 aa15.83■□□□□ 0.12
RPAIN-206ENST00000539417 ELP6Q0PNE2 266 aa15.83■□□□□ 0.12
RPAIN-206ENST00000539417 SIX1Q15475 284 aaPredicted RBP15.83■□□□□ 0.12
RPAIN-206ENST00000539417 RSPO4Q2I0M5 234 aaPredicted RBP15.83■□□□□ 0.12
RPAIN-206ENST00000539417 ZNF569Q5MCW4 686 aa15.83■□□□□ 0.12
RPAIN-206ENST00000539417 TPRG1LQ5T0D9 272 aa15.83■□□□□ 0.12
RPAIN-206ENST00000539417 STPG1Q5TH74 334 aa15.83■□□□□ 0.12
RPAIN-206ENST00000539417 LIPIQ6XZB0 460 aa15.83■□□□□ 0.12
RPAIN-206ENST00000539417 RFLNAQ6ZTI6 216 aa15.83■□□□□ 0.12
RPAIN-206ENST00000539417 DPPA4Q7L190 304 aa15.83■□□□□ 0.12
RPAIN-206ENST00000539417 MINDY1Q8N5J2 469 aa15.83■□□□□ 0.12
RPAIN-206ENST00000539417 TP53I13Q8NBR0 393 aaPredicted RBP15.83■□□□□ 0.12
RPAIN-206ENST00000539417 RMDN1Q96DB5 314 aa15.83■□□□□ 0.12
RPAIN-206ENST00000539417 OXNAD1Q96HP4 312 aaPredicted RBP15.83■□□□□ 0.12
RPAIN-206ENST00000539417 SLC25A51Q9H1U9 297 aa15.83■□□□□ 0.12
RPAIN-206ENST00000539417 DNPEPQ9ULA0 475 aa15.83■□□□□ 0.12
RPAIN-206ENST00000539417 PHTF1Q9UMS5 762 aa15.83■□□□□ 0.12
RPAIN-206ENST00000539417 DMTF1Q9Y222 760 aa15.83■□□□□ 0.12
RPAIN-206ENST00000539417 CEP250Q9BV73 2442 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 VILLO15195 856 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 KCNN4O15554 427 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 ZSCAN12O43309 604 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 HNF1BP35680 557 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 IGFALSP35858 605 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 CTSKP43235 329 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 SUOXP51687 545 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 GDF10P55107 478 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 GALNT3Q14435 633 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 CNGA3Q16281 694 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 PCSK7Q16549 785 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 SEL1L2Q5TEA6 688 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 ERAP2Q6P179 960 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 DARS2Q6PI48 645 aaKnown RBP15.82■□□□□ 0.12
RPAIN-206ENST00000539417 NYAP1Q6ZVC0 841 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 PID1Q7Z2X4 250 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 RABEPKQ7Z6M1 372 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 PELI3Q8N2H9 469 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 C17orf53Q8N3J3 647 aaPredicted RBP15.82■□□□□ 0.12
RPAIN-206ENST00000539417 LPCAT1Q8NF37 534 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 OR13H1Q8NG92 308 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 SLC35B2Q8TB61 432 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 FUBP1Q96AE4 644 aaKnown RBP15.82■□□□□ 0.12
RPAIN-206ENST00000539417 CENPTQ96BT3 561 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 TRIB3Q96RU7 358 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 CARD9Q9H257 536 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 PCDH9Q9HC56 1237 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 KLHL8Q9P2G9 620 aaPredicted RBP15.82■□□□□ 0.12
RPAIN-206ENST00000539417 FNDC3AQ9Y2H6 1198 aaKnown RBP15.82■□□□□ 0.12
RPAIN-206ENST00000539417 PPIL1Q9Y3C6 166 aa15.82■□□□□ 0.12
RPAIN-206ENST00000539417 PRR5-ARHGAP8B1AHC4 643 aa15.81■□□□□ 0.12
RPAIN-206ENST00000539417 PMPCBO75439 489 aa15.81■□□□□ 0.12
RPAIN-206ENST00000539417 TM7SF2O76062 418 aa15.81■□□□□ 0.12
RPAIN-206ENST00000539417 ATP1A1P05023 1023 aaKnown RBP15.81■□□□□ 0.12
RPAIN-206ENST00000539417 CES1P23141 567 aa15.81■□□□□ 0.12
RPAIN-206ENST00000539417 POLR2LP62875 67 aaKnown RBP15.81■□□□□ 0.12
RPAIN-206ENST00000539417 SGCGQ13326 291 aa15.81■□□□□ 0.12
RPAIN-206ENST00000539417 STAT4Q14765 748 aa15.81■□□□□ 0.12
RPAIN-206ENST00000539417 QPCTQ16769 361 aa15.81■□□□□ 0.12
RPAIN-206ENST00000539417 WSCD2Q2TBF2 565 aa15.81■□□□□ 0.12
RPAIN-206ENST00000539417 HLA-BQ31612 363 aa15.81■□□□□ 0.12
RPAIN-206ENST00000539417 KDELC1Q6UW63 502 aa15.81■□□□□ 0.12
RPAIN-206ENST00000539417 HSD11B1LQ7Z5J1 315 aa15.81■□□□□ 0.12
RPAIN-206ENST00000539417 CDKL3Q8IVW4 592 aaPredicted RBP15.81■□□□□ 0.12
RPAIN-206ENST00000539417 SLC22A18ASQ8N1D0 253 aa15.81■□□□□ 0.12
RPAIN-206ENST00000539417 MFSD2AQ8NA29 543 aa15.81■□□□□ 0.12
RPAIN-206ENST00000539417 CCDC110Q8TBZ0 833 aa15.81■□□□□ 0.12
RPAIN-206ENST00000539417 C1orf54Q8WWF1 131 aa15.81■□□□□ 0.12
RPAIN-206ENST00000539417 SCRN2Q96FV2 425 aa15.81■□□□□ 0.12
RPAIN-206ENST00000539417 MCCC1Q96RQ3 725 aaPredicted RBP15.81■□□□□ 0.12
RPAIN-206ENST00000539417 GAREM1Q9H706 876 aa15.81■□□□□ 0.12
RPAIN-206ENST00000539417 TMEM9BQ9NQ34 198 aa15.81■□□□□ 0.12
RPAIN-206ENST00000539417 KNL1Q8NG31 2342 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 A0A0J9YYE9 177 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 TLR4O00206 839 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 HEXIM1O94992 359 aaKnown RBP15.8■□□□□ 0.12
RPAIN-206ENST00000539417 TRBC1P01850 177 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 AKT2P31751 481 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 VIPR1P32241 457 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 NXPH1P58417 271 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 OLIG2Q13516 323 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 IRF4Q15306 451 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 SHBQ15464 509 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 UAP1L1Q3KQV9 507 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 ANKRD20A2Q5SQ80 823 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 ANKRD20A1Q5TYW2 823 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 ANKRD20A3Q5VUR7 823 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 DENND2CQ68D51 928 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 CRTC1Q6UUV9 634 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 ABI3BPQ7Z7G0 1075 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 PRUNE1Q86TP1 453 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 CBARPQ8N350 705 aaPredicted RBP15.8■□□□□ 0.12
RPAIN-206ENST00000539417 FAM71DQ8N9W8 422 aa15.8■□□□□ 0.12
RPAIN-206ENST00000539417 PLA2G15Q8NCC3 412 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms