RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 GABPB2Q8TAK5 448 aaPredicted RBP14.64□□□□□ -0.07
CDCA3-207ENST00000538862 CALML6Q8TD86 181 aa14.64□□□□□ -0.07
CDCA3-207ENST00000538862 ELMO2Q96JJ3 720 aa14.64□□□□□ -0.07
CDCA3-207ENST00000538862 PAAF1Q9BRP4 392 aa14.64□□□□□ -0.07
CDCA3-207ENST00000538862 FSD1LQ9BXM9 530 aa14.64□□□□□ -0.07
CDCA3-207ENST00000538862 SMOC2Q9H3U7 446 aa14.64□□□□□ -0.07
CDCA3-207ENST00000538862 ACSS2Q9NR19 701 aa14.64□□□□□ -0.07
CDCA3-207ENST00000538862 RBM22Q9NW64 420 aaKnown RBP eCLIP14.64□□□□□ -0.07
CDCA3-207ENST00000538862 ETAA1Q9NY74 926 aa14.64□□□□□ -0.07
CDCA3-207ENST00000538862 UTP6Q9NYH9 597 aaKnown RBP14.64□□□□□ -0.07
CDCA3-207ENST00000538862 FBXO5Q9UKT4 447 aa14.64□□□□□ -0.07
CDCA3-207ENST00000538862 G3BP2Q9UN86 482 aaKnown RBP14.64□□□□□ -0.07
CDCA3-207ENST00000538862 COPG1Q9Y678 874 aaKnown RBP14.64□□□□□ -0.07
CDCA3-207ENST00000538862 UNC80Q8N2C7 3258 aa14.63□□□□□ -0.07
CDCA3-207ENST00000538862 PATJQ8NI35 1801 aa14.63□□□□□ -0.07
CDCA3-207ENST00000538862 M0QZQ0 153 aa14.63□□□□□ -0.07
CDCA3-207ENST00000538862 RFXAPO00287 272 aa14.63□□□□□ -0.07
CDCA3-207ENST00000538862 ENPP3O14638 875 aa14.63□□□□□ -0.07
CDCA3-207ENST00000538862 HLA-DQB2P05538 268 aa14.63□□□□□ -0.07
CDCA3-207ENST00000538862 FOLH1Q04609 750 aa14.63□□□□□ -0.07
CDCA3-207ENST00000538862 PDK3Q15120 406 aa14.63□□□□□ -0.07
CDCA3-207ENST00000538862 RARS2Q5T160 578 aaKnown RBP14.63□□□□□ -0.07
CDCA3-207ENST00000538862 ARTNQ5T4W7 220 aa14.63□□□□□ -0.07
CDCA3-207ENST00000538862 TMEM198Q66K66 360 aa14.63□□□□□ -0.07
CDCA3-207ENST00000538862 NEPROQ6NW34 567 aa14.63□□□□□ -0.07
CDCA3-207ENST00000538862 RTN4RL1Q86UN2 441 aaPredicted RBP14.63□□□□□ -0.07
CDCA3-207ENST00000538862 CCNYL1Q8N7R7 359 aa14.63□□□□□ -0.07
CDCA3-207ENST00000538862 HEXDCQ8WVB3 486 aa14.63□□□□□ -0.07
CDCA3-207ENST00000538862 FCRL2Q96LA5 508 aaPredicted RBP14.63□□□□□ -0.07
CDCA3-207ENST00000538862 MRGPRX2Q96LB1 330 aa14.63□□□□□ -0.07
CDCA3-207ENST00000538862 Q9H521 79 aa14.63□□□□□ -0.07
CDCA3-207ENST00000538862 ARNT2Q9HBZ2 717 aa14.63□□□□□ -0.07
CDCA3-207ENST00000538862 SLC2A6Q9UGQ3 507 aa14.63□□□□□ -0.07
CDCA3-207ENST00000538862 PTPRDP23468 1912 aa14.63□□□□□ -0.07
CDCA3-207ENST00000538862 MYLKQ15746 1914 aa14.63□□□□□ -0.07
CDCA3-207ENST00000538862 EPOPA6NHQ4 379 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 SDHDO14521 159 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 GPR182O15218 404 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 ZNF623O75123 536 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 PMPCBO75439 489 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 BCAS2O75934 225 aaPredicted RBP14.62□□□□□ -0.07
CDCA3-207ENST00000538862 JUNP05412 331 aaKnown RBP14.62□□□□□ -0.07
CDCA3-207ENST00000538862 FOSL2P15408 326 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 CHN2P52757 468 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 CEACAM7Q14002 265 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 PDCD2Q16342 344 aaPredicted RBP14.62□□□□□ -0.07
CDCA3-207ENST00000538862 FAM83EQ2M2I3 478 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 ZNF470Q6ECI4 717 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 UGT2A3Q6UWM9 527 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 TRIM67Q6ZTA4 783 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 MARVELD2Q8N4S9 558 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 AFAP1L2Q8N4X5 818 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 RTL3Q8N8U3 475 aaKnown RBP14.62□□□□□ -0.07
CDCA3-207ENST00000538862 TXNDC5Q8NBS9 432 aaKnown RBP14.62□□□□□ -0.07
CDCA3-207ENST00000538862 ADCY4Q8NFM4 1077 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 SCAMP5Q8TAC9 235 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 TOP1MTQ969P6 601 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 LRGUKQ96M69 825 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 RANBP9Q96S59 729 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 RAD9AQ99638 391 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 OMDQ99983 421 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 SPATA16Q9BXB7 569 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 POMKQ9H5K3 350 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 EML4Q9HC35 981 aaKnown RBP14.62□□□□□ -0.07
CDCA3-207ENST00000538862 MRPL40Q9NQ50 206 aaKnown RBP14.62□□□□□ -0.07
CDCA3-207ENST00000538862 IGSF5Q9NSI5 407 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 TMLHEQ9NVH6 421 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 RAB26Q9ULW5 256 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 HEATR9A2RTY3 570 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 TCAF2A6NFQ2 919 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 WASH4PA8MWX3 477 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 CFLARO15519 480 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 MGEA5O60502 916 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 B3GAT3O94766 335 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 CAPNS1P04632 268 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 PABPC4LP0CB38 370 aaKnown RBP14.62□□□□□ -0.07
CDCA3-207ENST00000538862 ENO3P13929 434 aaPredicted RBP14.62□□□□□ -0.07
CDCA3-207ENST00000538862 CPB1P15086 417 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 XRCC1P18887 633 aaPredicted RBP14.62□□□□□ -0.07
CDCA3-207ENST00000538862 LEPRP48357 1165 aaKnown RBP14.62□□□□□ -0.07
CDCA3-207ENST00000538862 POLE2P56282 527 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 GALNT1Q10472 559 aaPredicted RBP14.62□□□□□ -0.07
CDCA3-207ENST00000538862 ADGRE1Q14246 886 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 SLC14A2Q15849 920 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 PSMD5Q16401 504 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 AGAP9Q5VTM2 703 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 CHSY3Q70JA7 882 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 GALNT7Q86SF2 657 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 LRRTM3Q86VH5 581 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 THEM5Q8N1Q8 247 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 PELI3Q8N2H9 469 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 NCSTNQ92542 709 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 DCUN1D1Q96GG9 259 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 TRIM4Q9C037 500 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 SLC25A51Q9H1U9 297 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 PACSIN3Q9UKS6 424 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 SQORQ9Y6N5 450 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 PRRC2BQ5JSZ5 2229 aaKnown RBP14.62□□□□□ -0.07
CDCA3-207ENST00000538862 A0A0C4DFX4 3053 aa14.62□□□□□ -0.07
CDCA3-207ENST00000538862 NYNRINQ9P2P1 1898 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms