RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 HHLA1C9JL84 531 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 TSPAN8P19075 237 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 ITGALP20701 1170 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 PTPN9P43378 593 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 POLD2P49005 469 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 GEMP55040 296 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 CCINQ13939 588 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 FAM133BQ5BKY9 247 aaKnown RBP7.28□□□□□ -1.24
MSH6-209ENST00000538136 NXNQ6DKJ4 435 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 C4orf33Q8N1A6 199 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 RHBDD1Q8TEB9 315 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 AZIN2Q96A70 460 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 VPS39Q96JC1 886 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 DNAJC1Q96KC8 554 aaKnown RBP7.28□□□□□ -1.24
MSH6-209ENST00000538136 PRICKLE1Q96MT3 831 aaPredicted RBP7.28□□□□□ -1.24
MSH6-209ENST00000538136 RHBGQ9H310 441 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 PFDN4Q9NQP4 134 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 IL36AQ9UHA7 158 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 FKBPLQ9UIM3 349 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 A0A1B0GVT2 93 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 APOC4-APOC2K7ER74 178 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 CACNB4O00305 520 aaPredicted RBP7.28□□□□□ -1.24
MSH6-209ENST00000538136 PHGDHO43175 533 aaKnown RBP7.28□□□□□ -1.24
MSH6-209ENST00000538136 LDB2O43679 373 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 TM7SF2O76062 418 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 METTL18O95568 372 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 SEMA4FO95754 770 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 APOC2P02655 101 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 ITGAVP06756 1048 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 RALBP11234 206 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 EZRP15311 586 aaKnown RBP7.28□□□□□ -1.24
MSH6-209ENST00000538136 DDX6P26196 483 aaKnown RBP eCLIP7.28□□□□□ -1.24
MSH6-209ENST00000538136 RFX3P48380 749 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 LIG3P49916 1009 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 ZP2Q05996 745 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 SULT2A1Q06520 285 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 SLC10A2Q12908 348 aaPredicted RBP7.28□□□□□ -1.24
MSH6-209ENST00000538136 DEFB133Q30KQ1 61 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 ASTLQ6HA08 431 aaPredicted RBP7.28□□□□□ -1.24
MSH6-209ENST00000538136 LPCAT2Q7L5N7 544 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 TMEM150AQ86TG1 271 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 TMC8Q8IU68 726 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 SRRM1Q8IYB3 904 aaKnown RBP7.28□□□□□ -1.24
MSH6-209ENST00000538136 CFAP206Q8IYR0 622 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 LZTR1Q8N653 840 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 MDGA1Q8NFP4 955 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 HERPUD2Q9BSE4 406 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 ACE2Q9BYF1 805 aaPredicted RBP7.28□□□□□ -1.24
MSH6-209ENST00000538136 FOXP3Q9BZS1 431 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 PAK5Q9P286 719 aa7.28□□□□□ -1.24
MSH6-209ENST00000538136 FOXO6A8MYZ6 492 aa7.27□□□□□ -1.24
MSH6-209ENST00000538136 RECQL5O94762 991 aaPredicted RBP7.27□□□□□ -1.24
MSH6-209ENST00000538136 SRCP12931 536 aa7.27□□□□□ -1.24
MSH6-209ENST00000538136 GFAPP14136 432 aa7.27□□□□□ -1.24
MSH6-209ENST00000538136 CDKN2BP42772 138 aa7.27□□□□□ -1.24
MSH6-209ENST00000538136 PLIN5Q00G26 463 aa7.27□□□□□ -1.24
MSH6-209ENST00000538136 HTR4Q13639 388 aa7.27□□□□□ -1.24
MSH6-209ENST00000538136 CRY1Q16526 586 aa7.27□□□□□ -1.24
MSH6-209ENST00000538136 MYLK3Q32MK0 819 aa7.27□□□□□ -1.24
MSH6-209ENST00000538136 MAP9Q49MG5 647 aa7.27□□□□□ -1.24
MSH6-209ENST00000538136 TEX44Q53QW1 395 aa7.27□□□□□ -1.24
MSH6-209ENST00000538136 SLC45A4Q5BKX6 768 aa7.27□□□□□ -1.24
MSH6-209ENST00000538136 PHF19Q5T6S3 580 aa7.27□□□□□ -1.24
MSH6-209ENST00000538136 ARFGAP1Q8N6T3 406 aa7.27□□□□□ -1.24
MSH6-209ENST00000538136 MAGEH1Q9H213 219 aa7.27□□□□□ -1.24
MSH6-209ENST00000538136 CARD9Q9H257 536 aa7.27□□□□□ -1.24
MSH6-209ENST00000538136 GLOD4Q9HC38 313 aa7.27□□□□□ -1.24
MSH6-209ENST00000538136 ANKRD12Q6UB98 2062 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 DOCK9Q9BZ29 2069 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 MYZAPP0CAP1 466 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 PAMP19021 973 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 PCK1P35558 622 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 ELK3P41970 407 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 POU5F1Q01860 360 aaKnown RBP7.27□□□□□ -1.25
MSH6-209ENST00000538136 USP4Q13107 963 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 SF3A2Q15428 464 aaKnown RBP7.27□□□□□ -1.25
MSH6-209ENST00000538136 LONRF1Q17RB8 773 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 SRLQ86TD4 932 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 FBXO36Q8NEA4 188 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 ELMO1Q92556 727 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 CXorf40BQ96DE9 158 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 DCBLD2Q96PD2 775 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 COL25A1Q9BXS0 654 aaPredicted RBP7.27□□□□□ -1.25
MSH6-209ENST00000538136 FAM83DQ9H4H8 585 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 LTB4R2Q9NPC1 389 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 PCDH12Q9NPG4 1184 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 ASF1AQ9Y294 204 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 CELSR3Q9NYQ7 3312 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 PSME4Q14997 1843 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 ALPK2Q86TB3 2170 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 DCDC2BA2VCK2 349 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 CAPN2P17655 700 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 AK4P27144 223 aaPredicted RBP7.27□□□□□ -1.25
MSH6-209ENST00000538136 MAP4P27816 1152 aaKnown RBP7.27□□□□□ -1.25
MSH6-209ENST00000538136 CLDN6P56747 220 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 INPP5AQ14642 412 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 LRRC14Q15048 493 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 CDKN3Q16667 212 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 PTPRNQ16849 979 aa7.27□□□□□ -1.25
MSH6-209ENST00000538136 TMEM196Q5HYL7 178 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms