RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 PTPRRQ15256 657 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 LRRC73Q5JTD7 316 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 IFT20Q8IY31 132 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 FBXO25Q8TCJ0 367 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 LYSMD1Q96S90 227 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 PCDH12Q9NPG4 1184 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 CD93Q9NPY3 652 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.35■■□□□ 1.49
HMGA2-208ENST00000537429 FZD4Q9ULV1 537 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 NCKAP1Q9Y2A7 1128 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 V9GYY5 206 aaPredicted RBP24.35■■□□□ 1.49
HMGA2-208ENST00000537429 AREL1O15033 823 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 IGLV3-19P01714 112 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 HNF1BP35680 557 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 MAGEA3P43357 314 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 ERCC6LQ2NKX8 1250 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 USP45Q70EL2 814 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 FRMD8Q9BZ67 464 aaPredicted RBP24.35■■□□□ 1.49
HMGA2-208ENST00000537429 TPSD1Q9BZJ3 242 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 MAGEE1Q9HCI5 957 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 XAB2Q9HCS7 855 aaKnown RBP24.35■■□□□ 1.49
HMGA2-208ENST00000537429 ZDHHC18Q9NUE0 388 aa24.35■■□□□ 1.49
HMGA2-208ENST00000537429 CAPN8A6NHC0 703 aa24.34■■□□□ 1.49
HMGA2-208ENST00000537429 SLC7A4O43246 635 aa24.34■■□□□ 1.49
HMGA2-208ENST00000537429 SPINT1O43278 529 aa24.34■■□□□ 1.49
HMGA2-208ENST00000537429 TPH1P17752 444 aa24.34■■□□□ 1.49
HMGA2-208ENST00000537429 NFKBIAP25963 317 aa24.34■■□□□ 1.49
HMGA2-208ENST00000537429 CARSP49589 748 aaKnown RBP24.34■■□□□ 1.49
HMGA2-208ENST00000537429 TAS2R38P59533 333 aa24.34■■□□□ 1.49
HMGA2-208ENST00000537429 TSSK4Q6SA08 328 aa24.34■■□□□ 1.49
HMGA2-208ENST00000537429 FAM129AQ9BZQ8 928 aa24.34■■□□□ 1.49
HMGA2-208ENST00000537429 FADS3Q9Y5Q0 445 aa24.34■■□□□ 1.49
HMGA2-208ENST00000537429 NPIPB15A6NHN6 443 aaPredicted RBP24.33■■□□□ 1.49
HMGA2-208ENST00000537429 PRR33A8MZF0 331 aa24.33■■□□□ 1.49
HMGA2-208ENST00000537429 AP1G1O43747 822 aa24.33■■□□□ 1.49
HMGA2-208ENST00000537429 GPR37L1O60883 481 aa24.33■■□□□ 1.49
HMGA2-208ENST00000537429 AVILO75366 819 aa24.33■■□□□ 1.49
HMGA2-208ENST00000537429 PIRTP0C851 137 aa24.33■■□□□ 1.49
HMGA2-208ENST00000537429 CUL1Q13616 776 aa24.33■■□□□ 1.49
HMGA2-208ENST00000537429 TMEM31Q5JXX7 168 aa24.33■■□□□ 1.49
HMGA2-208ENST00000537429 ERAP2Q6P179 960 aa24.33■■□□□ 1.49
HMGA2-208ENST00000537429 MAML2Q8IZL2 1156 aaPredicted RBP24.33■■□□□ 1.49
HMGA2-208ENST00000537429 IFT81Q8WYA0 676 aa24.33■■□□□ 1.49
HMGA2-208ENST00000537429 PWWP2AQ96N64 755 aa24.33■■□□□ 1.49
HMGA2-208ENST00000537429 SRPK1Q96SB4 655 aaKnown RBP24.33■■□□□ 1.49
HMGA2-208ENST00000537429 B4GALT6Q9UBX8 382 aa24.33■■□□□ 1.49
HMGA2-208ENST00000537429 SPO11Q9Y5K1 396 aa24.33■■□□□ 1.49
HMGA2-208ENST00000537429 ZNF217O75362 1048 aa24.32■■□□□ 1.48
HMGA2-208ENST00000537429 TDGF1P13385 188 aa24.32■■□□□ 1.48
HMGA2-208ENST00000537429 MMP12P39900 470 aa24.32■■□□□ 1.48
HMGA2-208ENST00000537429 NPY2RP49146 381 aa24.32■■□□□ 1.48
HMGA2-208ENST00000537429 FAM193AP78312 1265 aa24.32■■□□□ 1.48
HMGA2-208ENST00000537429 CSTF1Q05048 431 aaKnown RBP24.32■■□□□ 1.48
HMGA2-208ENST00000537429 ELP6Q0PNE2 266 aa24.32■■□□□ 1.48
HMGA2-208ENST00000537429 CDKN3Q16667 212 aa24.32■■□□□ 1.48
HMGA2-208ENST00000537429 CERCAMQ5T4B2 595 aa24.32■■□□□ 1.48
HMGA2-208ENST00000537429 FAM124AQ86V42 546 aa24.32■■□□□ 1.48
HMGA2-208ENST00000537429 ZCCHC9Q8N567 271 aaKnown RBP24.32■■□□□ 1.48
HMGA2-208ENST00000537429 RUBCNQ92622 972 aa24.32■■□□□ 1.48
HMGA2-208ENST00000537429 C1QTNF1Q9BXJ1 281 aa24.32■■□□□ 1.48
HMGA2-208ENST00000537429 ITM2BQ9Y287 266 aa24.32■■□□□ 1.48
HMGA2-208ENST00000537429 CACNA1IQ9P0X4 2223 aa24.32■■□□□ 1.48
HMGA2-208ENST00000537429 CCDC163A0A0D9SF12 145 aa24.31■■□□□ 1.48
HMGA2-208ENST00000537429 PLRG1O43660 514 aaKnown RBP24.31■■□□□ 1.48
HMGA2-208ENST00000537429 PPFIA2O75334 1257 aa24.31■■□□□ 1.48
HMGA2-208ENST00000537429 CYP2A6P11509 494 aaPredicted RBP24.31■■□□□ 1.48
HMGA2-208ENST00000537429 ECHS1P30084 290 aa24.31■■□□□ 1.48
HMGA2-208ENST00000537429 VIPR1P32241 457 aa24.31■■□□□ 1.48
HMGA2-208ENST00000537429 ADPRHP54922 357 aa24.31■■□□□ 1.48
HMGA2-208ENST00000537429 SESN2P58004 480 aaPredicted RBP24.31■■□□□ 1.48
HMGA2-208ENST00000537429 SEMG2Q02383 582 aa24.31■■□□□ 1.48
HMGA2-208ENST00000537429 CBLBQ13191 982 aa24.31■■□□□ 1.48
HMGA2-208ENST00000537429 MTM1Q13496 603 aa24.31■■□□□ 1.48
HMGA2-208ENST00000537429 FNBP1LQ5T0N5 605 aa24.31■■□□□ 1.48
HMGA2-208ENST00000537429 DPPA4Q7L190 304 aa24.31■■□□□ 1.48
HMGA2-208ENST00000537429 BRSK1Q8TDC3 778 aa24.31■■□□□ 1.48
HMGA2-208ENST00000537429 BLOC1S5Q8TDH9 187 aa24.31■■□□□ 1.48
HMGA2-208ENST00000537429 TRABDQ9H4I3 376 aa24.31■■□□□ 1.48
HMGA2-208ENST00000537429 BFARQ9NZS9 450 aa24.31■■□□□ 1.48
HMGA2-208ENST00000537429 HACD3Q9P035 362 aa24.31■■□□□ 1.48
HMGA2-208ENST00000537429 GGT7Q9UJ14 662 aa24.31■■□□□ 1.48
HMGA2-208ENST00000537429 A8MX80 341 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 AXIN1O15169 862 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 LHCGRP22888 699 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 RALGDSQ12967 914 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 HLTFQ14527 1009 aaKnown RBP eCLIP24.3■■□□□ 1.485e-7■□□□□ 8
HMGA2-208ENST00000537429 HIF1AQ16665 826 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 CRTC1Q6UUV9 634 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 TSPAN33Q86UF1 283 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 PDIK1LQ8N165 341 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 OR14C36Q8NHC7 312 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 IL22Q9GZX6 179 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 KDM4CQ9H3R0 1056 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 CYP8B1Q9UNU6 501 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 ZNF711Q9Y462 761 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 A0A0U1RQS6 177 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 MGAT1P26572 445 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 ACSL1P33121 698 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 ARL4CP56559 192 aa24.3■■□□□ 1.48
HMGA2-208ENST00000537429 DMWDQ09019 674 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms