RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 ZNF605Q86T29 641 aa12.55□□□□□ -0.4
PRKDC-207ENST00000536483 TTC7BQ86TV6 843 aa12.55□□□□□ -0.4
PRKDC-207ENST00000536483 PARGQ86W56 976 aa12.55□□□□□ -0.4
PRKDC-207ENST00000536483 ZNF354CQ86Y25 554 aa12.55□□□□□ -0.4
PRKDC-207ENST00000536483 RHOT2Q8IXI1 618 aa12.55□□□□□ -0.4
PRKDC-207ENST00000536483 TC2NQ8N9U0 490 aa12.55□□□□□ -0.4
PRKDC-207ENST00000536483 TSEN2Q8NCE0 465 aaKnown RBP12.55□□□□□ -0.4
PRKDC-207ENST00000536483 ZNF548Q8NEK5 533 aaPredicted RBP12.55□□□□□ -0.4
PRKDC-207ENST00000536483 OR6K2Q8NGY2 324 aa12.55□□□□□ -0.4
PRKDC-207ENST00000536483 IFI44Q8TCB0 444 aa12.55□□□□□ -0.4
PRKDC-207ENST00000536483 CENPTQ96BT3 561 aa12.55□□□□□ -0.4
PRKDC-207ENST00000536483 ZNF670Q9BS34 389 aa12.55□□□□□ -0.4
PRKDC-207ENST00000536483 POLR1BQ9H9Y6 1135 aa12.55□□□□□ -0.4
PRKDC-207ENST00000536483 USP29Q9HBJ7 922 aa12.55□□□□□ -0.4
PRKDC-207ENST00000536483 CPNE5Q9HCH3 593 aa12.55□□□□□ -0.4
PRKDC-207ENST00000536483 EVA1BQ9NVM1 165 aa12.55□□□□□ -0.4
PRKDC-207ENST00000536483 CTTNBP2NLQ9P2B4 639 aa12.55□□□□□ -0.4
PRKDC-207ENST00000536483 KLF15Q9UIH9 416 aa12.55□□□□□ -0.4
PRKDC-207ENST00000536483 ZNF462Q96JM2 2506 aa12.55□□□□□ -0.4
PRKDC-207ENST00000536483 CFAP46Q8IYW2 2715 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 CPED1A4D0V7 1026 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 IGLON5A6NGN9 336 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 H3BM21 787 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 TRAFD1O14545 582 aaPredicted RBP12.54□□□□□ -0.4
PRKDC-207ENST00000536483 TOR1BO14657 336 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 INSIG1O15503 277 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 DXOO77932 396 aaKnown RBP12.54□□□□□ -0.4
PRKDC-207ENST00000536483 KRT7P08729 469 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 NME1P15531 152 aaKnown RBP12.54□□□□□ -0.4
PRKDC-207ENST00000536483 TGM2P21980 687 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 FECHP22830 423 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 RABIFP47224 123 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 RGRP47804 291 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 HADHBP55084 474 aaKnown RBP12.54□□□□□ -0.4
PRKDC-207ENST00000536483 ERVPABLB-1P60509 514 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 AP1S1P61966 158 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 SGCGQ13326 291 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 PDE1CQ14123 709 aaPredicted RBP12.54□□□□□ -0.4
PRKDC-207ENST00000536483 DPYSL3Q14195 570 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 CDKN3Q16667 212 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 UGP2Q16851 508 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 ISXQ2M1V0 245 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 TAF1BQ53T94 588 aaPredicted RBP12.54□□□□□ -0.4
PRKDC-207ENST00000536483 TPRG1LQ5T0D9 272 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 ARHGAP40Q5TG30 622 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 LRRC38Q5VT99 294 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 BROXQ5VW32 411 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 ZCCHC8Q6NZY4 707 aaKnown RBP12.54□□□□□ -0.4
PRKDC-207ENST00000536483 GUSBP11Q6P575 273 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 ARHGAP36Q6ZRI8 547 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 SRLQ86TD4 932 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 TP53INP2Q8IXH6 220 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 RYBPQ8N488 228 aaPredicted RBP12.54□□□□□ -0.4
PRKDC-207ENST00000536483 TEX26Q8N6G2 289 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 SLC35G2Q8TBE7 412 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 HSPH1Q92598 858 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 MRFAP1L1Q96HT8 127 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 TSGA13Q96PP4 275 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 TRIM5Q9C035 493 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 DEF6Q9H4E7 631 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 SEPT3Q9UH03 358 aa12.54□□□□□ -0.4
PRKDC-207ENST00000536483 A0A1W2PNU3 283 aaPredicted RBP12.53□□□□□ -0.4
PRKDC-207ENST00000536483 A0A1W2PQ67 120 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 ERVH48-1M5A8F1 160 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 DFFAO00273 331 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 FPGTO14772 594 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 MUSKO15146 869 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 KLK10O43240 276 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 AQP9O43315 295 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 HTRA2O43464 458 aaPredicted RBP12.53□□□□□ -0.4
PRKDC-207ENST00000536483 JUNDP17535 347 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 CDH6P55285 790 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 TMPRSS3P57727 454 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 TAS2R40P59535 323 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 PFN3P60673 137 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 SLC10A7Q0GE19 358 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 ELP6Q0PNE2 266 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 GALNT2Q10471 571 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 LBRQ14739 615 aaKnown RBP12.53□□□□□ -0.4
PRKDC-207ENST00000536483 DEFB133Q30KQ1 61 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 ATP13A4Q4VNC1 1196 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 C3orf38Q5JPI3 329 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 CRTC1Q6UUV9 634 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 EFL1Q7Z2Z2 1120 aaKnown RBP12.53□□□□□ -0.4
PRKDC-207ENST00000536483 MAP7D3Q8IWC1 876 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 CCDC170Q8IYT3 715 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 PCDH19Q8TAB3 1148 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 LMX1AQ8TE12 382 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 KCNE4Q8WWG9 221 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 MGME1Q9BQP7 344 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 ATP13A3Q9H7F0 1226 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 SP110Q9HB58 689 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 ASCL3Q9NQ33 180 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 AMACRQ9UHK6 382 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 GGT7Q9UJ14 662 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 SATB2Q9UPW6 733 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 ITM2BQ9Y287 266 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 CSNK1G3Q9Y6M4 447 aa12.53□□□□□ -0.4
PRKDC-207ENST00000536483 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.52□□□□□ -0.41
PRKDC-207ENST00000536483 EME2A4GXA9 379 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms