RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 SLC7A14Q8TBB6 771 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 CYGBQ8WWM9 190 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 EDEM1Q92611 657 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 PCED1BQ96HM7 432 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 ZNF670Q9BS34 389 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 PCDHAC1Q9H158 963 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 STN1Q9H668 368 aaKnown RBP14.06□□□□□ -0.16
LIG1-203ENST00000536218 WDR41Q9HAD4 459 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 TMEM30AQ9NV96 361 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 PAK5Q9P286 719 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 KLQ9UEF7 1012 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 ZC3H7BQ9UGR2 993 aaKnown RBP14.06□□□□□ -0.16
LIG1-203ENST00000536218 MRPL42Q9Y6G3 142 aaKnown RBP14.06□□□□□ -0.16
LIG1-203ENST00000536218 E7ESA3 106 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 METTL18O95568 372 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 EEF1B2P24534 225 aaKnown RBP14.06□□□□□ -0.16
LIG1-203ENST00000536218 PIK3R1P27986 724 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 LRPAP1P30533 357 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 CAP1Q01518 475 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 SLC9B1Q4ZJI4 515 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 PIGGQ5H8A4 983 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 MBLAC2Q68D91 279 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 ATG14Q6ZNE5 492 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 GPRIN1Q7Z2K8 1008 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 BPIFB6Q8NFQ5 453 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 DLG3Q92796 817 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 MROQ9BYG7 248 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 COG4Q9H9E3 785 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 SLC30A1Q9Y6M5 507 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 YJEFN3A6XGL0 299 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 DCKP27707 260 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 GRIA1P42261 906 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 DPYSL2Q16555 572 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 TIGD5Q53EQ6 642 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 CYP2U1Q7Z449 544 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 C10orf107Q8IVU9 208 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 TP53INP2Q8IXH6 220 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 HACE1Q8IYU2 909 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 ZNF420Q8TAQ5 688 aaPredicted RBP14.06□□□□□ -0.16
LIG1-203ENST00000536218 WDR55Q9H6Y2 383 aaPredicted RBP14.06□□□□□ -0.16
LIG1-203ENST00000536218 TRMT13Q9NUP7 481 aaKnown RBP14.06□□□□□ -0.16
LIG1-203ENST00000536218 HACD3Q9P035 362 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 TRAF6Q9Y4K3 522 aa14.06□□□□□ -0.16
LIG1-203ENST00000536218 ZNF839A8K0R7 811 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 TOR1BO14657 336 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 CLPXO76031 633 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 DDHD2O94830 711 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 FGF3P11487 239 aaPredicted RBP14.05□□□□□ -0.16
LIG1-203ENST00000536218 HOXC8P31273 242 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 HNRNPFP52597 415 aaKnown RBP14.05□□□□□ -0.16
LIG1-203ENST00000536218 OCA2Q04671 838 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 DPYSQ14117 519 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 SLC25A52Q3SY17 297 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 SMYD5Q6GMV2 418 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 OFCC1Q8IZS5 231 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 CENPIQ92674 756 aaPredicted RBP14.05□□□□□ -0.16
LIG1-203ENST00000536218 OR52B2Q96RD2 323 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 FAM155AB1AL88 458 aaPredicted RBP14.05□□□□□ -0.16
LIG1-203ENST00000536218 F8W810 466 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 TAF4O00268 1085 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 CA12O43570 354 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 CSH1P0DML2 217 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 CSH2P0DML3 217 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 NCAM1P13591 858 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 SREBF2Q12772 1141 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 IRF5Q13568 498 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 KCNJ11Q14654 390 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 HEATR6Q6AI08 1181 aaKnown RBP14.05□□□□□ -0.16
LIG1-203ENST00000536218 NXNQ6DKJ4 435 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 ELMOD1Q8N336 334 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 SLC43A3Q8NBI5 491 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 ADAM2Q99965 735 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 C11orf84Q9BUA3 381 aaPredicted RBP14.05□□□□□ -0.16
LIG1-203ENST00000536218 ACSS2Q9NR19 701 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 DNAJC28Q9NX36 388 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 DTLQ9NZJ0 730 aa14.05□□□□□ -0.16
LIG1-203ENST00000536218 TEX28O15482 410 aa14.04□□□□□ -0.16
LIG1-203ENST00000536218 BCAS2O75934 225 aaPredicted RBP14.04□□□□□ -0.16
LIG1-203ENST00000536218 POLR2EP19388 210 aaKnown RBP14.04□□□□□ -0.16
LIG1-203ENST00000536218 CRHR1P34998 444 aa14.04□□□□□ -0.16
LIG1-203ENST00000536218 GMPRP36959 345 aa14.04□□□□□ -0.16
LIG1-203ENST00000536218 DPP6P42658 865 aa14.04□□□□□ -0.16
LIG1-203ENST00000536218 INAVAQ3KP66 663 aa14.04□□□□□ -0.16
LIG1-203ENST00000536218 CCDC58Q4VC31 144 aa14.04□□□□□ -0.16
LIG1-203ENST00000536218 UBE2UQ5VVX9 321 aa14.04□□□□□ -0.16
LIG1-203ENST00000536218 C4orf22Q6V702 233 aa14.04□□□□□ -0.16
LIG1-203ENST00000536218 SERINC5Q86VE9 423 aa14.04□□□□□ -0.16
LIG1-203ENST00000536218 NACC2Q96BF6 587 aa14.04□□□□□ -0.16
LIG1-203ENST00000536218 SMOQ99835 787 aa14.04□□□□□ -0.16
LIG1-203ENST00000536218 ANKRD60Q9BZ19 345 aa14.04□□□□□ -0.16
LIG1-203ENST00000536218 SMYD2Q9NRG4 433 aa14.04□□□□□ -0.16
LIG1-203ENST00000536218 PIGVQ9NUD9 493 aa14.04□□□□□ -0.16
LIG1-203ENST00000536218 ANKMY1Q9P2S6 941 aa14.04□□□□□ -0.16
LIG1-203ENST00000536218 B3GNT3Q9Y2A9 372 aa14.04□□□□□ -0.16
LIG1-203ENST00000536218 AP3B1O00203 1094 aa14.04□□□□□ -0.16
LIG1-203ENST00000536218 GPR182O15218 404 aa14.04□□□□□ -0.16
LIG1-203ENST00000536218 SEPT4O43236 478 aa14.04□□□□□ -0.16
LIG1-203ENST00000536218 AKAP10O43572 662 aa14.04□□□□□ -0.16
LIG1-203ENST00000536218 TIPRLO75663 272 aa14.04□□□□□ -0.16
LIG1-203ENST00000536218 SERPINE1P05121 402 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms