RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 KLQ9UEF7 1012 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 IP6K2Q9UHH9 426 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 OR1A2Q9Y585 309 aa16.28■□□□□ 0.2
CLSTN3-204ENST00000535313 CACNB4O00305 520 aaPredicted RBP16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 MPOP05164 745 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 RARAP10276 462 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 TGM2P21980 687 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 ITPKBP27987 946 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 SRP54P61011 504 aaKnown RBP16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 GABREP78334 506 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 ZBED6P86452 979 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 SLC10A7Q0GE19 358 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 NFKBIBQ15653 356 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 ALG11Q2TAA5 492 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 LVRNQ6Q4G3 990 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 DPPA4Q7L190 304 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 GKN2Q86XP6 184 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 TP53INP2Q8IXH6 220 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 SDR16C5Q8N3Y7 309 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 TEKT4Q8WW24 435 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 GRAMD1AQ96CP6 724 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 WDR92Q96MX6 357 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 ZNF578Q96N58 590 aaPredicted RBP16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 CSPG4P5Q96PW8 444 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 NUP85Q9BW27 656 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 CLPBQ9H078 707 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 ANAPC7Q9UJX3 599 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 PADI4Q9UM07 663 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 CAPN11Q9UMQ6 739 aa16.27■□□□□ 0.2
CLSTN3-204ENST00000535313 A0A1W2PQ67 120 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 TRAFD1O14545 582 aaPredicted RBP16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 TCEA3O75764 348 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 RECQL5O94762 991 aaPredicted RBP16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 TNFP01375 233 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 CELA2BP08218 269 aaPredicted RBP16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 TCF4P15884 667 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 NFKBIAP25963 317 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 SERPINB6P35237 376 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 PBX1P40424 430 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 LSSP48449 732 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 RALGDSQ12967 914 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 KRT81Q14533 505 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 TCEA2Q15560 299 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 ISXQ2M1V0 245 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 CRTC1Q6UUV9 634 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 LIPIQ6XZB0 460 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 RBM44Q6ZP01 1051 aaKnown RBP16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 ATPAF2Q8N5M1 289 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 ARL10Q8N8L6 244 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 NIPA2Q8N8Q9 360 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 WDR48Q8TAF3 677 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 CRELD1Q96HD1 420 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 POLR1BQ9H9Y6 1135 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 ETNK2Q9NVF9 386 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 GULP1Q9UBP9 304 aa16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 LUC7L2Q9Y383 392 aaKnown RBP16.26■□□□□ 0.19
CLSTN3-204ENST00000535313 LOC400499M0QZD8 3231 aa16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 LRRK1Q38SD2 2015 aa16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 A8MX80 341 aa16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 MYO1FO00160 1098 aa16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 SOCS5O75159 536 aa16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 CYP1A2P05177 515 aa16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 KELP23276 732 aa16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 SSR1P43307 286 aaKnown RBP16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 PCBP4P57723 403 aaKnown RBP16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 CCDC173Q0VFZ6 552 aa16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 ACOX1Q15067 660 aa16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 SOWAHCQ53LP3 525 aaPredicted RBP16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 PERM1Q5SV97 790 aa16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 TXNRD3NBQ6F5E7 133 aa16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 PLA2G15Q8NCC3 412 aa16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 PCDH19Q8TAB3 1148 aa16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 PDCD6IPQ8WUM4 868 aaKnown RBP16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 BTBD6Q96KE9 485 aa16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 NUDCD1Q96RS6 583 aa16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 CCDC3Q9BQI4 270 aa16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 SYNDIG1Q9H7V2 258 aa16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 PCDH18Q9HCL0 1135 aa16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 SIRPGQ9P1W8 387 aa16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 GPR34Q9UPC5 381 aa16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 DGKBQ9Y6T7 804 aa16.25■□□□□ 0.19
CLSTN3-204ENST00000535313 RP1P56715 2156 aa16.24■□□□□ 0.19
CLSTN3-204ENST00000535313 ANKRD36A6QL64 1941 aa16.24■□□□□ 0.19
CLSTN3-204ENST00000535313 A0A087X0T9 212 aa16.24■□□□□ 0.19
CLSTN3-204ENST00000535313 TTC24A2A3L6 582 aaPredicted RBP16.24■□□□□ 0.19
CLSTN3-204ENST00000535313 EIF4E1BA6NMX2 242 aaKnown RBP16.24■□□□□ 0.19
CLSTN3-204ENST00000535313 HTRA2O43464 458 aaPredicted RBP16.24■□□□□ 0.19
CLSTN3-204ENST00000535313 MAFKO60675 156 aa16.24■□□□□ 0.19
CLSTN3-204ENST00000535313 DXOO77932 396 aaKnown RBP16.24■□□□□ 0.19
CLSTN3-204ENST00000535313 PEX11BO96011 259 aa16.24■□□□□ 0.19
CLSTN3-204ENST00000535313 FAM228BP0C875 321 aa16.24■□□□□ 0.19
CLSTN3-204ENST00000535313 CDH6P55285 790 aa16.24■□□□□ 0.19
CLSTN3-204ENST00000535313 KIAA1024LP59773 190 aa16.24■□□□□ 0.19
CLSTN3-204ENST00000535313 SLC25A11Q02978 314 aaKnown RBP16.24■□□□□ 0.19
CLSTN3-204ENST00000535313 HADHQ16836 314 aaKnown RBP16.24■□□□□ 0.19
CLSTN3-204ENST00000535313 CCDC122Q5T0U0 273 aa16.24■□□□□ 0.19
CLSTN3-204ENST00000535313 MARC1Q5VT66 337 aa16.24■□□□□ 0.19
CLSTN3-204ENST00000535313 ALKBH5Q6P6C2 394 aaKnown RBP16.24■□□□□ 0.19
CLSTN3-204ENST00000535313 ZNF248Q8NDW4 579 aa16.24■□□□□ 0.19
CLSTN3-204ENST00000535313 OR56A4Q8NGH8 313 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms