RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 CSKP41240 450 aa13.45□□□□□ -0.26
BEST1-208ENST00000534553 RGRP47804 291 aa13.45□□□□□ -0.26
BEST1-208ENST00000534553 GRIA4P48058 902 aa13.45□□□□□ -0.26
BEST1-208ENST00000534553 ZNF140P52738 457 aaPredicted RBP13.45□□□□□ -0.26
BEST1-208ENST00000534553 TAS2R39P59534 338 aa13.45□□□□□ -0.26
BEST1-208ENST00000534553 NCALDP61601 193 aa13.45□□□□□ -0.26
BEST1-208ENST00000534553 ZXDBP98169 803 aa13.45□□□□□ -0.26
BEST1-208ENST00000534553 IRF9Q00978 393 aa13.45□□□□□ -0.26
BEST1-208ENST00000534553 TYSND1Q2T9J0 566 aa13.45□□□□□ -0.26
BEST1-208ENST00000534553 FSCBQ5H9T9 825 aa13.45□□□□□ -0.26
BEST1-208ENST00000534553 PTAR1Q7Z6K3 402 aaPredicted RBP13.45□□□□□ -0.26
BEST1-208ENST00000534553 HS6ST3Q8IZP7 471 aa13.45□□□□□ -0.26
BEST1-208ENST00000534553 OR4L1Q8NH43 312 aa13.45□□□□□ -0.26
BEST1-208ENST00000534553 POF1BQ8WVV4 589 aa13.45□□□□□ -0.26
BEST1-208ENST00000534553 SKA1Q96BD8 255 aa13.45□□□□□ -0.26
BEST1-208ENST00000534553 ALG14Q96F25 216 aa13.45□□□□□ -0.26
BEST1-208ENST00000534553 OMDQ99983 421 aa13.45□□□□□ -0.26
BEST1-208ENST00000534553 FBXO6Q9NRD1 293 aaPredicted RBP13.45□□□□□ -0.26
BEST1-208ENST00000534553 CXXC1Q9P0U4 656 aaPredicted RBP13.45□□□□□ -0.26
BEST1-208ENST00000534553 HEY2Q9UBP5 337 aa13.45□□□□□ -0.26
BEST1-208ENST00000534553 ARL5AQ9Y689 179 aa13.45□□□□□ -0.26
BEST1-208ENST00000534553 TTC24A2A3L6 582 aaPredicted RBP13.44□□□□□ -0.26
BEST1-208ENST00000534553 TRAFD1O14545 582 aaPredicted RBP13.44□□□□□ -0.26
BEST1-208ENST00000534553 PHGDHO43175 533 aaKnown RBP13.44□□□□□ -0.26
BEST1-208ENST00000534553 SOCS5O75159 536 aa13.44□□□□□ -0.26
BEST1-208ENST00000534553 CD160O95971 181 aa13.44□□□□□ -0.26
BEST1-208ENST00000534553 RBP1P09455 135 aa13.44□□□□□ -0.26
BEST1-208ENST00000534553 SAT1P21673 171 aa13.44□□□□□ -0.26
BEST1-208ENST00000534553 LPOP22079 712 aaPredicted RBP13.44□□□□□ -0.26
BEST1-208ENST00000534553 MZF1P28698 734 aaPredicted RBP13.44□□□□□ -0.26
BEST1-208ENST00000534553 ABCG1P45844 678 aa13.44□□□□□ -0.26
BEST1-208ENST00000534553 ERVFC1P60507 584 aa13.44□□□□□ -0.26
BEST1-208ENST00000534553 ITGA9Q13797 1035 aa13.44□□□□□ -0.26
BEST1-208ENST00000534553 PLPP4Q5VZY2 271 aa13.44□□□□□ -0.26
BEST1-208ENST00000534553 LRRC8EQ6NSJ5 796 aa13.44□□□□□ -0.26
BEST1-208ENST00000534553 ZCCHC23Q6ZST2 131 aa13.44□□□□□ -0.26
BEST1-208ENST00000534553 MTDHQ86UE4 582 aaKnown RBP13.44□□□□□ -0.26
BEST1-208ENST00000534553 KIRREL3Q8IZU9 778 aa13.44□□□□□ -0.26
BEST1-208ENST00000534553 CENPLQ8N0S6 344 aaPredicted RBP13.44□□□□□ -0.26
BEST1-208ENST00000534553 ACVR1CQ8NER5 493 aa13.44□□□□□ -0.26
BEST1-208ENST00000534553 SPPL3Q8TCT6 385 aa13.44□□□□□ -0.26
BEST1-208ENST00000534553 PDCD6IPQ8WUM4 868 aaKnown RBP13.44□□□□□ -0.26
BEST1-208ENST00000534553 STON2Q8WXE9 905 aa13.44□□□□□ -0.26
BEST1-208ENST00000534553 DNAJC1Q96KC8 554 aaKnown RBP13.44□□□□□ -0.26
BEST1-208ENST00000534553 SCYL1Q96KG9 808 aa13.44□□□□□ -0.26
BEST1-208ENST00000534553 TBATAQ96M53 351 aa13.44□□□□□ -0.26
BEST1-208ENST00000534553 SAMD11Q96NU1 681 aa13.44□□□□□ -0.26
BEST1-208ENST00000534553 RAB3IPQ96QF0 476 aaPredicted RBP13.44□□□□□ -0.26
BEST1-208ENST00000534553 LHX3Q9UBR4 397 aa13.44□□□□□ -0.26
BEST1-208ENST00000534553 RUVBL2Q9Y230 463 aaKnown RBP13.44□□□□□ -0.26
BEST1-208ENST00000534553 VWA7Q9Y334 891 aa13.44□□□□□ -0.26
BEST1-208ENST00000534553 H7C0S8 307 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 CCL16O15467 120 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 SNAP91O60641 907 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 S1PR4O95977 384 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 GOT2P00505 430 aaKnown RBP13.43□□□□□ -0.26
BEST1-208ENST00000534553 ALOX15P16050 662 aaPredicted RBP13.43□□□□□ -0.26
BEST1-208ENST00000534553 ARSDP51689 593 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 STC1P52823 247 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 KRT72Q14CN4 511 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 AARS2Q5JTZ9 985 aaKnown RBP13.43□□□□□ -0.26
BEST1-208ENST00000534553 HECTD2Q5U5R9 776 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 CNSTQ6PJW8 725 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 ASRGL1Q7L266 308 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 BBS7Q8IWZ6 715 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 CMTM8Q8IZV2 173 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 TNS4Q8IZW8 715 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 FSTL5Q8N475 847 aaPredicted RBP13.43□□□□□ -0.26
BEST1-208ENST00000534553 KCTD4Q8WVF5 259 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 CDKN2AIPNLQ96HQ2 116 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 EXOC2Q96KP1 924 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 TMEM237Q96Q45 408 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 SLC46A2Q9BY10 475 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 GPAMQ9HCL2 828 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 ABCB8Q9NUT2 735 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 ZNF358Q9NW07 568 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 TBC1D14Q9P2M4 693 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 MYLKQ15746 1914 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 SLCO1B7G3V0H7 640 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 FZD6O60353 706 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 GJB3O75712 270 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 PRLP01236 227 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 LTA4HP09960 611 aaKnown RBP13.43□□□□□ -0.26
BEST1-208ENST00000534553 TCF3P15923 654 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 PMLP29590 882 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 AQP5P55064 265 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 ACAP2Q15057 778 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 GPR158Q5T848 1215 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 CEP97Q8IW35 865 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.43□□□□□ -0.26
BEST1-208ENST00000534553 KIAA1958Q8N8K9 716 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 LPCAT1Q8NF37 534 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 OTUB2Q96DC9 234 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 LRMDAQ9H2I8 198 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 ARHGEF3Q9NR81 526 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 DNAJC28Q9NX36 388 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 ZDHHC7Q9NXF8 308 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 LNPEPQ9UIQ6 1025 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 APOBEC2Q9Y235 224 aaKnown RBP13.43□□□□□ -0.26
BEST1-208ENST00000534553 DNAJC16Q9Y2G8 782 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms