RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	ZCCHC23	Q6ZST2	131 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	APTX	Q7Z2E3	356 aa	Known RBP	15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	TSTD1	Q8NFU3	115 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	LRRC19	Q9H756	370 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PCYOX1	Q9UHG3	505 aa		15.79	■□□□□ 0.12
NCAPD3-213	ENST00000534532	KLRG2	A4D1S0	409 aa	Predicted RBP	15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	POLD2	P49005	469 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	VIT	Q6UXI7	678 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CERS6	Q6ZMG9	384 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	OTOP3	Q7RTS5	596 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	IFNLR1	Q8IU57	520 aa	Predicted RBP	15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	WDR36	Q8NI36	951 aa	Known RBP	15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	BTBD9	Q96Q07	612 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CPXM1	Q96SM3	734 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	S100A13	Q99584	98 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ACAT2	Q9BWD1	397 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SUCO	Q9UBS9	1254 aa	Known RBP	15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ANGPT4	Q9Y264	503 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	VWA7	Q9Y334	891 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	N6AMT1	Q9Y5N5	214 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PLIN4	Q96Q06	1357 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	RECQL5	O94762	991 aa	Predicted RBP	15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PCCB	P05166	539 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	NR2F1	P10589	423 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PURA	Q00577	322 aa	Known RBP	15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	GPAT3	Q53EU6	434 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	TMPRSS6	Q8IU80	811 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	OXNAD1	Q96HP4	312 aa	Predicted RBP	15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SLC4A5	Q9BY07	1137 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	KLHL3	Q9UH77	587 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532		A0A1B0GW55	424 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	FCHO1	O14526	889 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	HLA-DQA2	P01906	255 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	DUX4L2	P0CJ85	424 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	DUX4L3	P0CJ86	424 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	DUX4L4	P0CJ87	422 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	DUX4L5	P0CJ88	424 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	DUX4L6	P0CJ89	424 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	DUX4L7	P0CJ90	424 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	FSHR	P23945	695 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PIWIL4	Q7Z3Z4	852 aa	Known RBP	15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	XYLT1	Q86Y38	959 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	TCAIM	Q8N3R3	496 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ZNF248	Q8NDW4	579 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ITFG1	Q8TB96	612 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PRCC	Q92733	491 aa	Predicted RBP	15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	DUX4	Q9UBX2	424 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	AP4S1	Q9Y587	144 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	FPGT	O14772	594 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	RPP40	O75818	363 aa	Known RBP	15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CST3	P01034	146 aa	Predicted RBP	15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	MOSPD2	Q8NHP6	518 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CSPG4P5	Q96PW8	444 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	COL6A1	P12109	1028 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	TRMT5	Q32P41	509 aa	Known RBP	15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SNX30	Q5VWJ9	437 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	AADACL2	Q6P093	401 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	RNF145	Q96MT1	663 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	TMEM175	Q9BSA9	504 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	TBCD	Q9BTW9	1192 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	DPEP2	Q9H4A9	486 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ADAM30	Q9UKF2	790 aa		15.78	■□□□□ 0.12
NCAPD3-213	ENST00000534532	IGKV6D-41	A0A0C4DH26	115 aa		15.77	■□□□□ 0.12
NCAPD3-213	ENST00000534532	KCNU1	A8MYU2	1149 aa		15.77	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PEX11A	O75192	247 aa		15.77	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SSR2	P43308	183 aa		15.77	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CTBP1	Q13363	440 aa		15.77	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ATP13A5	Q4VNC0	1218 aa		15.77	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SNX32	Q86XE0	403 aa		15.77	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SRFBP1	Q8NEF9	429 aa	Known RBP	15.77	■□□□□ 0.12
NCAPD3-213	ENST00000534532	APOL4	Q9BPW4	351 aa		15.77	■□□□□ 0.12
NCAPD3-213	ENST00000534532	FUT8	Q9BYC5	575 aa		15.77	■□□□□ 0.12
NCAPD3-213	ENST00000534532	IGLV3-22	A0A075B6J6	115 aa		15.77	■□□□□ 0.12
NCAPD3-213	ENST00000534532	TALDO1	P37837	337 aa		15.77	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CPSF6	Q16630	551 aa	Known RBP eCLIP	15.77	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PLA2G4E	Q3MJ16	856 aa		15.77	■□□□□ 0.12
NCAPD3-213	ENST00000534532	RNF44	Q7L0R7	432 aa		15.77	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CDYL2	Q8N8U2	506 aa		15.77	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ANKRD7	Q92527	254 aa		15.77	■□□□□ 0.12
NCAPD3-213	ENST00000534532	ZNF75CP	Q92670	426 aa	Predicted RBP	15.77	■□□□□ 0.12
NCAPD3-213	ENST00000534532	CNPPD1	Q9BV87	410 aa		15.77	■□□□□ 0.12
NCAPD3-213	ENST00000534532	SLITRK2	Q9H156	845 aa		15.77	■□□□□ 0.12
NCAPD3-213	ENST00000534532	PCDH12	Q9NPG4	1184 aa		15.77	■□□□□ 0.12
NCAPD3-213	ENST00000534532	NQO1	P15559	274 aa	Known RBP	15.77	■□□□□ 0.11
NCAPD3-213	ENST00000534532	CDC73	Q6P1J9	531 aa		15.77	■□□□□ 0.11
NCAPD3-213	ENST00000534532	OR4K2	Q8NGD2	314 aa		15.77	■□□□□ 0.11
NCAPD3-213	ENST00000534532	OR52L1	Q8NGH7	329 aa		15.77	■□□□□ 0.11
NCAPD3-213	ENST00000534532	ATXN2L	Q8WWM7	1075 aa	Known RBP	15.77	■□□□□ 0.11
NCAPD3-213	ENST00000534532	RNFT2	Q96EX2	444 aa		15.77	■□□□□ 0.11
NCAPD3-213	ENST00000534532	ADGRA3	Q8IWK6	1321 aa		15.77	■□□□□ 0.11
NCAPD3-213	ENST00000534532	NRP1	O14786	923 aa		15.77	■□□□□ 0.11
NCAPD3-213	ENST00000534532	CDH3	P22223	829 aa		15.77	■□□□□ 0.11
NCAPD3-213	ENST00000534532	INAVA	Q3KP66	663 aa		15.77	■□□□□ 0.11
NCAPD3-213	ENST00000534532	FNBP1L	Q5T0N5	605 aa		15.77	■□□□□ 0.11
NCAPD3-213	ENST00000534532	C4orf32	Q8N8J7	132 aa		15.77	■□□□□ 0.11
NCAPD3-213	ENST00000534532	SETD9	Q8NE22	299 aa		15.77	■□□□□ 0.11
NCAPD3-213	ENST00000534532	RDH11	Q8TC12	318 aa		15.77	■□□□□ 0.11

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms