RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 PPP1R16AQ96I34 528 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 TSGA13Q96PP4 275 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 POP1Q99575 1024 aaKnown RBP4.06□□□□□ -1.76
SOX6-217ENST00000533870 SP110Q9HB58 689 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 GLOD4Q9HC38 313 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 IL20Q9NYY1 176 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 MTRRQ9UBK8 725 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 ARIH1Q9Y4X5 557 aaPredicted RBP4.06□□□□□ -1.76
SOX6-217ENST00000533870 ASB4Q9Y574 426 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 TCRBV7S2A1N4TA0A589 114 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 C2orf81A6NN90 581 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 STX16-NPEPL1H3BU86 382 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 SLC28A1O00337 649 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 FBP2O00757 339 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 STX16O14662 325 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 PDPK1O15530 556 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 TPST1O60507 370 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 JCHAINP01591 159 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 FGF3P11487 239 aaPredicted RBP4.06□□□□□ -1.76
SOX6-217ENST00000533870 SAT1P21673 171 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 SLC5A2P31639 672 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 IFNGR2P38484 337 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 HNF4AP41235 474 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 TGFB2P61812 414 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 ERVK-8P63133 956 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 SCAPQ12770 1279 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 TCP10Q12799 353 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 CDO1Q16878 200 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 SPRED3Q2MJR0 410 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 ZFP69Q49AA0 526 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 HSD17B12Q53GQ0 312 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 MARC1Q5VT66 337 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 ZDHHC20Q5W0Z9 365 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 LPCAT4Q643R3 524 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 ZNF549Q6P9A3 640 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 SCML4Q8N228 414 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 TBC1D19Q8N5T2 526 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 LRRC17Q8N6Y2 441 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 C7orf31Q8N865 590 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 PTGR2Q8N8N7 351 aaPredicted RBP4.06□□□□□ -1.76
SOX6-217ENST00000533870 TFAP2CQ92754 450 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 CSPG4P5Q96PW8 444 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 FZD8Q9H461 694 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 MROH8Q9H579 483 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 RGS18Q9NS28 235 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 GIMAP4Q9NUV9 329 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 PLA2G4CQ9UP65 541 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 ERVK-11Q9UQG0 969 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 CLRN2A0PK11 232 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 H0YC42 278 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 GPR25O00155 361 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 ORC5O43913 435 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 RHOBTB1O94844 696 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 ATG7O95352 703 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 IFNA16P05015 189 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 XRCC1P18887 633 aaPredicted RBP4.06□□□□□ -1.76
SOX6-217ENST00000533870 PTBP1P26599 531 aaKnown RBP eCLIP4.06□□□□□ -1.76
SOX6-217ENST00000533870 RFC2P35250 354 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 ENTPD1P49961 510 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 TPTEP56180 551 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 EIF4HQ15056 248 aaKnown RBP4.06□□□□□ -1.76
SOX6-217ENST00000533870 AGAP7PQ5VUJ5 663 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 TRIQKQ629K1 86 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 CDC73Q6P1J9 531 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 NEK5Q6P3R8 708 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 TAS2R42Q7RTR8 314 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 AMIGO2Q86SJ2 522 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 HID1Q8IV36 788 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 MARCH10Q8NA82 808 aaPredicted RBP4.06□□□□□ -1.76
SOX6-217ENST00000533870 FKBP10Q96AY3 582 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 KIF12Q96FN5 646 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 SNX27Q96L92 541 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 CEP295NLQ96MC4 621 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 GINS4Q9BRT9 223 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 BBS2Q9BXC9 721 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 CDHR5Q9HBB8 845 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 VTA1Q9NP79 307 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 ARHGEF4Q9NR80 690 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 GMPPBQ9Y5P6 360 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 A0A1W2PP18 115 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 SPDYE2BA6NHP3 402 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 A8MUI8 341 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 KMOO15229 486 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 ESR1P03372 595 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 SPDYE6P0CI01 402 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 CSH1P0DML2 217 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 CSH2P0DML3 217 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 NR4A1P22736 598 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 S100A3P33764 101 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 ARL2P36404 184 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 CTSKP43235 329 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 NUMBP49757 651 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 IL5RAQ01344 420 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 OXA1LQ15070 435 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 SYT16Q17RD7 645 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 USP43Q70EL4 1123 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 ALYREFQ86V81 257 aaKnown RBP4.06□□□□□ -1.76
SOX6-217ENST00000533870 ANKRD13BQ86YJ7 626 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 SLC25A41Q8N5S1 370 aa4.06□□□□□ -1.76
SOX6-217ENST00000533870 OR52E4Q8NGH9 312 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms