RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 DOLKQ9UPQ8 538 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 CLCA2Q9UQC9 943 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 TTLL3Q9Y4R7 772 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 PCDHGC4Q9Y5F7 938 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 UNC13CQ8NB66 2214 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 ZFC3H1O60293 1989 aaKnown RBP10.49□□□□□ -0.73
CAPN1-225ENST00000533704 GOLGA6CA6NDK9 693 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 GOLGA6BA6NDN3 693 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 GCATO75600 419 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 RECQL5O94762 991 aaPredicted RBP10.49□□□□□ -0.73
CAPN1-225ENST00000533704 MT-CO3P00414 261 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 CPP00450 1065 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 CAPNS1P04632 268 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 CELA2BP08218 269 aaPredicted RBP10.49□□□□□ -0.73
CAPN1-225ENST00000533704 GOLGA6DP0CG33 693 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 CKMT1AP12532 417 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 TSHRP16473 764 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 HTR1BP28222 390 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 HNRNPH3P31942 346 aaKnown RBP10.49□□□□□ -0.73
CAPN1-225ENST00000533704 TAS2R40P59535 323 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 RALGDSQ12967 914 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 DPYSL3Q14195 570 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 NFATC4Q14934 902 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 MARC1Q5VT66 337 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 ZCCHC8Q6NZY4 707 aaKnown RBP10.49□□□□□ -0.73
CAPN1-225ENST00000533704 LIPIQ6XZB0 460 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 DPPA4Q7L190 304 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 EFL1Q7Z2Z2 1120 aaKnown RBP10.49□□□□□ -0.73
CAPN1-225ENST00000533704 VSTM4Q8IW00 320 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 PLA2G15Q8NCC3 412 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 IFI44Q8TCB0 444 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 MAPK15Q8TD08 544 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 LRRN4Q8WUT4 740 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 ECHDC3Q96DC8 303 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 NXPE2Q96DL1 559 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 DCBLD2Q96PD2 775 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 NUDCD1Q96RS6 583 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 DNAJC7Q99615 494 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 CHP1Q99653 195 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 SUDS3Q9H7L9 328 aaPredicted RBP10.49□□□□□ -0.73
CAPN1-225ENST00000533704 SYNDIG1Q9H7V2 258 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 NOD2Q9HC29 1040 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 ABHD10Q9NUJ1 306 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 GOLGA6AQ9NYA3 693 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 SIRPGQ9P1W8 387 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 RCOR3Q9P2K3 495 aaPredicted RBP10.49□□□□□ -0.73
CAPN1-225ENST00000533704 GULP1Q9UBP9 304 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 B4GALT6Q9UBX8 382 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 KLQ9UEF7 1012 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 MOSPD1Q9UJG1 213 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 PNMA8BQ9ULN7 279 aaPredicted RBP10.49□□□□□ -0.73
CAPN1-225ENST00000533704 LHX6Q9UPM6 363 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 CSNK1G3Q9Y6M4 447 aa10.49□□□□□ -0.73
CAPN1-225ENST00000533704 DSPP15924 2871 aaKnown RBP10.49□□□□□ -0.73
CAPN1-225ENST00000533704 LY6G6EA0A0G2JKS1 128 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 SSU72P8A0A1W2PR75 194 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 CACNB4O00305 520 aaPredicted RBP10.48□□□□□ -0.73
CAPN1-225ENST00000533704 TRAFD1O14545 582 aaPredicted RBP10.48□□□□□ -0.73
CAPN1-225ENST00000533704 TOR1BO14657 336 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 OPA1O60313 960 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 MFAP3LO75121 409 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 RASGRP1O95267 797 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 PEX11BO96011 259 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 KRT7P08729 469 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 TMEM253P0C7T8 217 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 TNNT1P13805 278 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 CTPS1P17812 591 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 IL4RP24394 825 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 PEX5P50542 639 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 BLKP51451 505 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 SRP54P61011 504 aaKnown RBP10.48□□□□□ -0.73
CAPN1-225ENST00000533704 TRAF2Q12933 501 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 MTM1Q13496 603 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 NR0B2Q15466 257 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 ALG11Q2TAA5 492 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 ANKRD20A8PQ5CZ79 823 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 NCBP2-AS2Q69YL0 99 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 GUSBP11Q6P575 273 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 NYAP1Q6ZVC0 841 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 MAP7D3Q8IWC1 876 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 FAM181AQ8N9Y4 354 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 ATL2Q8NHH9 583 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 PCDH19Q8TAB3 1148 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 HNRNPLLQ8WVV9 542 aaKnown RBP10.48□□□□□ -0.73
CAPN1-225ENST00000533704 GLMNQ92990 594 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 CCDC42Q96M95 316 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 WDR92Q96MX6 357 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 SEMA3CQ99985 751 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 MGME1Q9BQP7 344 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 NHEJ1Q9H9Q4 299 aaPredicted RBP10.48□□□□□ -0.73
CAPN1-225ENST00000533704 U3KQA8 63 aa10.48□□□□□ -0.73
CAPN1-225ENST00000533704 DMXL2Q8TDJ6 3036 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 LRRD1A4D1F6 860 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 LMO7DNF2Z398 122 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 YY2O15391 372 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 ZZEF1O43149 2961 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 SOCS5O75159 536 aa10.47□□□□□ -0.73
CAPN1-225ENST00000533704 CSO75390 466 aaKnown RBP10.47□□□□□ -0.73
CAPN1-225ENST00000533704 CYP2A6P11509 494 aaPredicted RBP10.47□□□□□ -0.73
CAPN1-225ENST00000533704 CR2P20023 1033 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms