RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 DNAJC28Q9NX36 388 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 ZNF624Q9P2J8 865 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-236ENST00000533667 XPR1Q9UBH6 696 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 IKZF3Q9UKT9 509 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 SLC15A5A6NIM6 579 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 B4GALT4O60513 344 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 USP46P62068 366 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 MRPS6P82932 125 aaKnown RBP7.04□□□□□ -1.28
CTNND1-236ENST00000533667 ZNF846Q147U1 533 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 ZNHIT3Q15649 155 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-236ENST00000533667 MAPK11Q15759 364 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 LSM12Q3MHD2 195 aaKnown RBP7.04□□□□□ -1.28
CTNND1-236ENST00000533667 SLC25A52Q3SY17 297 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 GALNT18Q6P9A2 607 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 TRIM40Q6P9F5 258 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 FBXL19Q6PCT2 694 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 RNASE11Q8TAA1 199 aaKnown RBP7.04□□□□□ -1.28
CTNND1-236ENST00000533667 ELMO1Q92556 727 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 TNFRSF25Q93038 417 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 NKD2Q969F2 451 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-236ENST00000533667 TEFMQ96QE5 360 aaKnown RBP7.04□□□□□ -1.28
CTNND1-236ENST00000533667 ADAM2Q99965 735 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 WDR12Q9GZL7 423 aaKnown RBP7.04□□□□□ -1.28
CTNND1-236ENST00000533667 MRPL39Q9NYK5 338 aaKnown RBP7.04□□□□□ -1.28
CTNND1-236ENST00000533667 EHD3Q9NZN3 535 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 SLC9A8Q9Y2E8 581 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 REXO2Q9Y3B8 237 aaKnown RBP7.04□□□□□ -1.28
CTNND1-236ENST00000533667 STON1Q9Y6Q2 735 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 URADA6NGE7 173 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 WWP2O00308 870 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 DDX3YO15523 660 aaKnown RBP7.04□□□□□ -1.28
CTNND1-236ENST00000533667 DNAJA2O60884 412 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 AVILO75366 819 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 CYP7B1O75881 506 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 TAL1P17542 331 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-236ENST00000533667 MMP8P22894 467 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 ADCYAP1R1P41586 468 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 IDH2P48735 452 aaKnown RBP7.04□□□□□ -1.28
CTNND1-236ENST00000533667 CSNK2BP67870 215 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 FOLH1Q04609 750 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 CDK18Q07002 472 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 ITGADQ13349 1161 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 GRM3Q14832 879 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 PTPRNQ16849 979 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 FAM92BQ6ZTR7 304 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 USP50Q70EL3 339 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-236ENST00000533667 C16orf62Q7Z3J2 963 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 GALNT15Q8N3T1 639 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 C4orf32Q8N8J7 132 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 C12orf50Q8NA57 414 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-236ENST00000533667 ZNF671Q8TAW3 534 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 RCN3Q96D15 328 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 DGCR14Q96DF8 476 aaKnown RBP7.04□□□□□ -1.28
CTNND1-236ENST00000533667 FAXDC2Q96IV6 333 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 PGLYRP2Q96PD5 576 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 TINF2Q9BSI4 451 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 POLR1BQ9H9Y6 1135 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 PCDH18Q9HCL0 1135 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 TIMMDC1Q9NPL8 285 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 SMPD4Q9NXE4 827 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 NUDT5Q9UKK9 219 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 ZNF510Q9Y2H8 683 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 VWA7Q9Y334 891 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 PLLPQ9Y342 182 aa7.04□□□□□ -1.28
CTNND1-236ENST00000533667 TRAV19A0A0A6YYK7 116 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 SERPINB7O75635 380 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 GOT1P17174 413 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 AKR1D1P51857 326 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 CRYBB1P53674 252 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 UGT2B15P54855 530 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 INHBEP58166 350 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 TAS2R40P59535 323 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 SUZ12Q15022 739 aaKnown RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 PUS10Q3MIT2 529 aaKnown RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 ATP13A4Q4VNC1 1196 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 DCLRE1AQ6PJP8 1040 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 SPESP1Q6UW49 350 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 FAM20CQ8IXL6 584 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 RBFAQ8N0V3 343 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 PQLC1Q8N2U9 271 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 POMGNT2Q8NAT1 580 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 PHC3Q8NDX5 983 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 BPIFB6Q8NFQ5 453 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 OR4L1Q8NH43 312 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 SUSD6Q92537 303 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 TIFAQ96CG3 184 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 VPS35Q96QK1 796 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 SEMA3CQ99985 751 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 RPRD1BQ9NQG5 326 aaKnown RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 AP4B1Q9Y6B7 739 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 SLIT3O75094 1523 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 OR6C75A6NL08 312 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 H3BNX3 289 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 KPNA3O00505 521 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-236ENST00000533667 OR6B1O95007 311 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 OR6A2O95222 327 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 CST1P01037 141 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 SLC26A3P40879 764 aa7.03□□□□□ -1.28
CTNND1-236ENST00000533667 CLK2P49760 499 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms