RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 ADAMTS16Q8TE57 1224 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 L3HYPDHQ96EM0 354 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 SENP8Q96LD8 212 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 PPP1R10Q96QC0 940 aaKnown RBP16.7■□□□□ 0.26
CTSB-228ENST00000533455 GPATCH1Q9BRR8 931 aaKnown RBP16.7■□□□□ 0.26
CTSB-228ENST00000533455 VPS45Q9NRW7 570 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 CCM2LQ9NUG4 571 aaPredicted RBP16.7■□□□□ 0.26
CTSB-228ENST00000533455 ABCD2Q9UBJ2 740 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 TLL2Q9Y6L7 1015 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 MYBPHLA2RUH7 354 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 TRIM64A6NGJ6 449 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 AQP12BA6NM10 295 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 WISP3O95389 354 aaPredicted RBP16.7■□□□□ 0.26
CTSB-228ENST00000533455 NELFEP18615 380 aaKnown RBP16.7■□□□□ 0.26
CTSB-228ENST00000533455 IMPDH1P20839 514 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 HTR7P34969 479 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 FUNDC1Q8IVP5 155 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 AQP12AQ8IXF9 295 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 LZTR1Q8N653 840 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 PCYOX1LQ8NBM8 494 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 CANT1Q8WVQ1 401 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 MRGPRX2Q96LB1 330 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 A0A087WXM4 84 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 IGLV3-25P01717 112 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 HLA-DQB2P05538 268 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 CKMT2P17540 419 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 GPX3P22352 226 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 MYF6P23409 242 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 STX1BP61266 288 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 RWDD4Q6NW29 188 aaKnown RBP16.69■□□□□ 0.26
CTSB-228ENST00000533455 PRMT9Q6P2P2 845 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 LAYNQ6UX15 382 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 RPS27LQ71UM5 84 aaKnown RBP16.69■□□□□ 0.26
CTSB-228ENST00000533455 SCML4Q8N228 414 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 FAM47BQ8NA70 645 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 TNIP2Q8NFZ5 429 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 OR9I1Q8NGQ6 314 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 GABPB2Q8TAK5 448 aaPredicted RBP16.69■□□□□ 0.26
CTSB-228ENST00000533455 DQX1Q8TE96 717 aaKnown RBP16.69■□□□□ 0.26
CTSB-228ENST00000533455 GTF3C2Q8WUA4 911 aaPredicted RBP16.69■□□□□ 0.26
CTSB-228ENST00000533455 PPWD1Q96BP3 646 aaKnown RBP16.69■□□□□ 0.26
CTSB-228ENST00000533455 DCPSQ96C86 337 aaKnown RBP16.69■□□□□ 0.26
CTSB-228ENST00000533455 SMARCD1Q96GM5 515 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 FSD1LQ9BXM9 530 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 TRIM15Q9C019 465 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 TBC1D13Q9NVG8 400 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 ZNHIT2Q9UHR6 403 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 UBFD1O14562 309 aaKnown RBP16.69■□□□□ 0.26
CTSB-228ENST00000533455 FGF10O15520 208 aaPredicted RBP16.69■□□□□ 0.26
CTSB-228ENST00000533455 IGFBP6P24592 240 aaPredicted RBP16.69■□□□□ 0.26
CTSB-228ENST00000533455 YWHAQP27348 245 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 SLC26A3P40879 764 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 GRIA3P42263 894 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 CHRNA4P43681 627 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 GALK1P51570 392 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 NME5P56597 212 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 NUP107P57740 925 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 ATP6V0D1P61421 351 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 NFKB2Q00653 900 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 EIF4EBP2Q13542 120 aaPredicted RBP16.69■□□□□ 0.26
CTSB-228ENST00000533455 SEPT6Q14141 434 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 MAP7D1Q3KQU3 841 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 ZNF789Q5FWF6 425 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 CROCCP3Q8IVE0 287 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 GPRC5AQ8NFJ5 357 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 HOPXQ9BPY8 73 aaPredicted RBP16.69■□□□□ 0.26
CTSB-228ENST00000533455 CSNK1G1Q9HCP0 422 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 CDH9Q9ULB4 789 aa16.69■□□□□ 0.26
CTSB-228ENST00000533455 PATJQ8NI35 1801 aa16.68■□□□□ 0.26
CTSB-228ENST00000533455 DLGAP1O14490 977 aa16.68■□□□□ 0.26
CTSB-228ENST00000533455 AKAP10O43572 662 aa16.68■□□□□ 0.26
CTSB-228ENST00000533455 PMPCBO75439 489 aa16.68■□□□□ 0.26
CTSB-228ENST00000533455 MYL3P08590 195 aa16.68■□□□□ 0.26
CTSB-228ENST00000533455 ALDOCP09972 364 aaKnown RBP16.68■□□□□ 0.26
CTSB-228ENST00000533455 HSD17B1P14061 328 aa16.68■□□□□ 0.26
CTSB-228ENST00000533455 ZBED5Q49AG3 693 aa16.68■□□□□ 0.26
CTSB-228ENST00000533455 ZNF678Q5SXM1 525 aa16.68■□□□□ 0.26
CTSB-228ENST00000533455 HECTD2Q5U5R9 776 aa16.68■□□□□ 0.26
CTSB-228ENST00000533455 MANEALQ5VSG8 457 aa16.68■□□□□ 0.26
CTSB-228ENST00000533455 TIGD7Q6NT04 549 aaPredicted RBP16.68■□□□□ 0.26
CTSB-228ENST00000533455 MOB2Q70IA6 237 aa16.68■□□□□ 0.26
CTSB-228ENST00000533455 GPR141Q7Z602 305 aa16.68■□□□□ 0.26
CTSB-228ENST00000533455 RETREG3Q86VR2 466 aa16.68■□□□□ 0.26
CTSB-228ENST00000533455 CAMK1DQ8IU85 385 aa16.68■□□□□ 0.26
CTSB-228ENST00000533455 RNF135Q8IUD6 432 aa16.68■□□□□ 0.26
CTSB-228ENST00000533455 MIPOL1Q8TD10 442 aa16.68■□□□□ 0.26
CTSB-228ENST00000533455 RNF34Q969K3 372 aa16.68■□□□□ 0.26
CTSB-228ENST00000533455 C19orf60Q96EN9 201 aa16.68■□□□□ 0.26
CTSB-228ENST00000533455 SLC39A8Q9C0K1 460 aa16.68■□□□□ 0.26
CTSB-228ENST00000533455 LIN28AQ9H9Z2 209 aaKnown RBP16.68■□□□□ 0.26
CTSB-228ENST00000533455 ARNT2Q9HBZ2 717 aa16.68■□□□□ 0.26
CTSB-228ENST00000533455 NDUFAF1Q9Y375 327 aa16.68■□□□□ 0.26
CTSB-228ENST00000533455 CROCCQ5TZA2 2017 aa16.67■□□□□ 0.26
CTSB-228ENST00000533455 hCG_2014768A0A024R1R8 64 aa16.67■□□□□ 0.26
CTSB-228ENST00000533455 NME4O00746 187 aa16.67■□□□□ 0.26
CTSB-228ENST00000533455 F2P00734 622 aa16.67■□□□□ 0.26
CTSB-228ENST00000533455 C7P10643 843 aa16.67■□□□□ 0.26
CTSB-228ENST00000533455 PLK1P53350 603 aa16.67■□□□□ 0.26
CTSB-228ENST00000533455 CDH15P55291 814 aa16.67■□□□□ 0.26
CTSB-228ENST00000533455 BNIP2Q12982 314 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms