RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 ARL10Q8N8L6 244 aa17.92■□□□□ 0.46
PCF11-206ENST00000533018 FNIP1Q8TF40 1166 aa17.92■□□□□ 0.46
PCF11-206ENST00000533018 KCNE4Q8WWG9 221 aa17.92■□□□□ 0.46
PCF11-206ENST00000533018 GRAMD1AQ96CP6 724 aa17.92■□□□□ 0.46
PCF11-206ENST00000533018 TRIM11Q96F44 468 aa17.92■□□□□ 0.46
PCF11-206ENST00000533018 WDR92Q96MX6 357 aa17.92■□□□□ 0.46
PCF11-206ENST00000533018 CWC15Q9P013 229 aaKnown RBP17.92■□□□□ 0.46
PCF11-206ENST00000533018 GPR34Q9UPC5 381 aa17.92■□□□□ 0.46
PCF11-206ENST00000533018 ENTPD2Q9Y5L3 495 aa17.92■□□□□ 0.46
PCF11-206ENST00000533018 A0A1W2PQC6 194 aa17.91■□□□□ 0.46
PCF11-206ENST00000533018 CACNB4O00305 520 aaPredicted RBP17.91■□□□□ 0.46
PCF11-206ENST00000533018 CASC3O15234 703 aaKnown RBP17.91■□□□□ 0.46
PCF11-206ENST00000533018 KLK10O43240 276 aa17.91■□□□□ 0.46
PCF11-206ENST00000533018 LRCH4O75427 683 aa17.91■□□□□ 0.46
PCF11-206ENST00000533018 DXOO77932 396 aaKnown RBP17.91■□□□□ 0.46
PCF11-206ENST00000533018 RENBPP51606 427 aa17.91■□□□□ 0.46
PCF11-206ENST00000533018 NSUN2Q08J23 767 aaKnown RBP eCLIP17.91■□□□□ 0.46
PCF11-206ENST00000533018 MTM1Q13496 603 aa17.91■□□□□ 0.46
PCF11-206ENST00000533018 ZNF235Q14590 738 aa17.91■□□□□ 0.46
PCF11-206ENST00000533018 LBRQ14739 615 aaKnown RBP17.91■□□□□ 0.46
PCF11-206ENST00000533018 SMTNL2Q2TAL5 461 aa17.91■□□□□ 0.46
PCF11-206ENST00000533018 AFMIDQ63HM1 303 aa17.91■□□□□ 0.46
PCF11-206ENST00000533018 E4F1Q66K89 784 aaPredicted RBP17.91■□□□□ 0.46
PCF11-206ENST00000533018 CAVIN1Q6NZI2 390 aaKnown RBP17.91■□□□□ 0.46
PCF11-206ENST00000533018 NYAP1Q6ZVC0 841 aa17.91■□□□□ 0.46
PCF11-206ENST00000533018 PLA2G15Q8NCC3 412 aa17.91■□□□□ 0.46
PCF11-206ENST00000533018 WDR48Q8TAF3 677 aa17.91■□□□□ 0.46
PCF11-206ENST00000533018 PDCD6IPQ8WUM4 868 aaKnown RBP17.91■□□□□ 0.46
PCF11-206ENST00000533018 SLC39A7Q92504 469 aa17.91■□□□□ 0.46
PCF11-206ENST00000533018 HSPH1Q92598 858 aa17.91■□□□□ 0.46
PCF11-206ENST00000533018 HIC2Q96JB3 615 aa17.91■□□□□ 0.46
PCF11-206ENST00000533018 NAP1L5Q96NT1 182 aaPredicted RBP17.91■□□□□ 0.46
PCF11-206ENST00000533018 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.91■□□□□ 0.46
PCF11-206ENST00000533018 WDR70Q9NW82 654 aa17.91■□□□□ 0.46
PCF11-206ENST00000533018 SEPT3Q9UH03 358 aa17.91■□□□□ 0.46
PCF11-206ENST00000533018 MOSPD1Q9UJG1 213 aa17.91■□□□□ 0.46
PCF11-206ENST00000533018 LRP4O75096 1905 aa17.91■□□□□ 0.46
PCF11-206ENST00000533018 UNC13CQ8NB66 2214 aa17.9■□□□□ 0.46
PCF11-206ENST00000533018 TTC24A2A3L6 582 aaPredicted RBP17.9■□□□□ 0.46
PCF11-206ENST00000533018 H3BRJ5 948 aa17.9■□□□□ 0.46
PCF11-206ENST00000533018 RECQL5O94762 991 aaPredicted RBP17.9■□□□□ 0.46
PCF11-206ENST00000533018 PRB1P04280 392 aa17.9■□□□□ 0.46
PCF11-206ENST00000533018 MYBL1P10243 752 aa17.9■□□□□ 0.46
PCF11-206ENST00000533018 ARL4AP40617 200 aa17.9■□□□□ 0.46
PCF11-206ENST00000533018 PRKCIP41743 596 aa17.9■□□□□ 0.46
PCF11-206ENST00000533018 HCAR3P49019 387 aa17.9■□□□□ 0.46
PCF11-206ENST00000533018 ZNF135P52742 658 aaPredicted RBP17.9■□□□□ 0.46
PCF11-206ENST00000533018 ACOX1Q15067 660 aa17.9■□□□□ 0.46
PCF11-206ENST00000533018 AGERQ15109 404 aa17.9■□□□□ 0.46
PCF11-206ENST00000533018 TDRD12Q587J7 1177 aaKnown RBP17.9■□□□□ 0.46
PCF11-206ENST00000533018 LVRNQ6Q4G3 990 aa17.9■□□□□ 0.46
PCF11-206ENST00000533018 CYP4V2Q6ZWL3 525 aaPredicted RBP17.9■□□□□ 0.46
PCF11-206ENST00000533018 TP53INP2Q8IXH6 220 aa17.9■□□□□ 0.46
PCF11-206ENST00000533018 LZTR1Q8N653 840 aa17.9■□□□□ 0.46
PCF11-206ENST00000533018 KYQ8NBH2 561 aa17.9■□□□□ 0.46
PCF11-206ENST00000533018 PDXPQ96GD0 296 aa17.9■□□□□ 0.46
PCF11-206ENST00000533018 ASCL3Q9NQ33 180 aa17.9■□□□□ 0.46
PCF11-206ENST00000533018 ATMQ13315 3056 aa17.9■□□□□ 0.46
PCF11-206ENST00000533018 COL27A1Q8IZC6 1860 aaPredicted RBP17.9■□□□□ 0.46
PCF11-206ENST00000533018 A0A1B0GTH6 734 aa17.89■□□□□ 0.45
PCF11-206ENST00000533018 TEX51A0A1B0GUA7 166 aa17.89■□□□□ 0.45
PCF11-206ENST00000533018 PCK1P35558 622 aa17.89■□□□□ 0.45
PCF11-206ENST00000533018 TMPRSS3P57727 454 aa17.89■□□□□ 0.45
PCF11-206ENST00000533018 AP1S1P61966 158 aa17.89■□□□□ 0.45
PCF11-206ENST00000533018 SLC10A7Q0GE19 358 aa17.89■□□□□ 0.45
PCF11-206ENST00000533018 DPYSQ14117 519 aa17.89■□□□□ 0.45
PCF11-206ENST00000533018 TMCO4Q5TGY1 634 aa17.89■□□□□ 0.45
PCF11-206ENST00000533018 DENND2CQ68D51 928 aa17.89■□□□□ 0.45
PCF11-206ENST00000533018 TMCO3Q6UWJ1 677 aa17.89■□□□□ 0.45
PCF11-206ENST00000533018 LIPIQ6XZB0 460 aa17.89■□□□□ 0.45
PCF11-206ENST00000533018 DPPA4Q7L190 304 aa17.89■□□□□ 0.45
PCF11-206ENST00000533018 SDR16C5Q8N3Y7 309 aa17.89■□□□□ 0.45
PCF11-206ENST00000533018 ARL14Q8N4G2 192 aa17.89■□□□□ 0.45
PCF11-206ENST00000533018 OR56A4Q8NGH8 313 aa17.89■□□□□ 0.45
PCF11-206ENST00000533018 WDR36Q8NI36 951 aaKnown RBP17.89■□□□□ 0.45
PCF11-206ENST00000533018 FUBP1Q96AE4 644 aaKnown RBP17.89■□□□□ 0.45
PCF11-206ENST00000533018 CCDC74AQ96AQ1 378 aa17.89■□□□□ 0.45
PCF11-206ENST00000533018 ECHDC3Q96DC8 303 aa17.89■□□□□ 0.45
PCF11-206ENST00000533018 SLC46A1Q96NT5 459 aa17.89■□□□□ 0.45
PCF11-206ENST00000533018 PSKH2Q96QS6 385 aa17.89■□□□□ 0.45
PCF11-206ENST00000533018 CPNE5Q9HCH3 593 aa17.89■□□□□ 0.45
PCF11-206ENST00000533018 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.89■□□□□ 0.45
PCF11-206ENST00000533018 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.88■□□□□ 0.45
PCF11-206ENST00000533018 A0A1W2PNU3 283 aaPredicted RBP17.88■□□□□ 0.45
PCF11-206ENST00000533018 CFAP69A5D8W1 941 aa17.88■□□□□ 0.45
PCF11-206ENST00000533018 TMEM202A6NGA9 273 aa17.88■□□□□ 0.45
PCF11-206ENST00000533018 ATXN7O15265 892 aaPredicted RBP17.88■□□□□ 0.45
PCF11-206ENST00000533018 AMPD1P23109 780 aa17.88■□□□□ 0.45
PCF11-206ENST00000533018 KELP23276 732 aa17.88■□□□□ 0.45
PCF11-206ENST00000533018 UCNP55089 124 aa17.88■□□□□ 0.45
PCF11-206ENST00000533018 C19orf57Q0VDD7 668 aa17.88■□□□□ 0.45
PCF11-206ENST00000533018 RALGDSQ12967 914 aa17.88■□□□□ 0.45
PCF11-206ENST00000533018 BOLA3Q53S33 107 aa17.88■□□□□ 0.45
PCF11-206ENST00000533018 ARHGAP40Q5TG30 622 aa17.88■□□□□ 0.45
PCF11-206ENST00000533018 TAF8Q7Z7C8 310 aa17.88■□□□□ 0.45
PCF11-206ENST00000533018 BBS5Q8N3I7 341 aa17.88■□□□□ 0.45
PCF11-206ENST00000533018 NSMCE1Q8WV22 266 aa17.88■□□□□ 0.45
PCF11-206ENST00000533018 ZNF599Q96NL3 588 aa17.88■□□□□ 0.45
PCF11-206ENST00000533018 GFM1Q96RP9 751 aaKnown RBP17.88■□□□□ 0.45
PCF11-206ENST00000533018 SUDS3Q9H7L9 328 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms