RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 TEX33O43247 280 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 PALMO75781 387 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 PLA2G2AP14555 144 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 DESP17661 470 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 GM2AP17900 193 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 ERCC2P18074 760 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 TNFAIP3P21580 790 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 RHDQ02161 417 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 AFMIDQ63HM1 303 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 PLEKHA7Q6IQ23 1121 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 LVRNQ6Q4G3 990 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 RFX8Q6ZV50 586 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 CLEC14AQ86T13 490 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 GKN2Q86XP6 184 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 SFTPA2Q8IWL1 248 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 TP53INP2Q8IXH6 220 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 ARL14Q8N4G2 192 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 SCG3Q8WXD2 468 aaKnown RBP17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 OR1E3Q8WZA6 343 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 TTC9Q92623 222 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 FUBP1Q96AE4 644 aaKnown RBP17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 ECHDC3Q96DC8 303 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 LIN37Q96GY3 246 aaPredicted RBP17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 RBM15Q96T37 977 aaKnown RBP eCLIP17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 CINPQ9BW66 212 aaPredicted RBP17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 FOXP3Q9BZS1 431 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 ATP13A3Q9H7F0 1226 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 EPB41L5Q9HCM4 733 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 FGF22Q9HCT0 170 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 MRPL40Q9NQ50 206 aaKnown RBP17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 SCN8AQ9UQD0 1980 aa17.18■□□□□ 0.34
RPUSD4-207ENST00000532800 TMEM202A6NGA9 273 aa17.17■□□□□ 0.34
RPUSD4-207ENST00000532800 D6RAR5 112 aa17.17■□□□□ 0.34
RPUSD4-207ENST00000532800 DFFAO00273 331 aa17.17■□□□□ 0.34
RPUSD4-207ENST00000532800 RECQL5O94762 991 aaPredicted RBP17.17■□□□□ 0.34
RPUSD4-207ENST00000532800 RPLP0P05388 317 aaKnown RBP17.17■□□□□ 0.34
RPUSD4-207ENST00000532800 SERPINA4P29622 427 aa17.17■□□□□ 0.34
RPUSD4-207ENST00000532800 CSNK1DP48730 415 aa17.17■□□□□ 0.34
RPUSD4-207ENST00000532800 CLN3Q13286 438 aa17.17■□□□□ 0.34
RPUSD4-207ENST00000532800 ERMARDQ5T6L9 678 aa17.17■□□□□ 0.34
RPUSD4-207ENST00000532800 LIPIQ6XZB0 460 aa17.17■□□□□ 0.34
RPUSD4-207ENST00000532800 PELI3Q8N2H9 469 aa17.17■□□□□ 0.34
RPUSD4-207ENST00000532800 AOPEPQ8N6M6 819 aa17.17■□□□□ 0.34
RPUSD4-207ENST00000532800 SNRNP27Q8WVK2 155 aaKnown RBP17.17■□□□□ 0.34
RPUSD4-207ENST00000532800 GFM1Q96RP9 751 aaKnown RBP17.17■□□□□ 0.34
RPUSD4-207ENST00000532800 SP110Q9HB58 689 aa17.17■□□□□ 0.34
RPUSD4-207ENST00000532800 PARVAQ9NVD7 372 aa17.17■□□□□ 0.34
RPUSD4-207ENST00000532800 DONSONQ9NYP3 566 aa17.17■□□□□ 0.34
RPUSD4-207ENST00000532800 UNC13CQ8NB66 2214 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 COL6A6A6NMZ7 2263 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 TTC24A2A3L6 582 aaPredicted RBP17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 LRRC53A6NM62 1247 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 A8MX80 341 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 K7ENP7 123 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 PLD2O14939 933 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 DAPK3O43293 454 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 TNFP01375 233 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 ITGA2BP08514 1039 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 ELFN1P0C7U0 828 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 CCDC172P0C7W6 258 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 HGFP14210 728 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 MIPP30301 263 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 KIAA1024LP59773 190 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 BCL2L1Q07817 233 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 LY6DQ14210 128 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 PPP6R3Q5H9R7 873 aaPredicted RBP17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 KIAA1614Q5VZ46 1190 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 E4F1Q66K89 784 aaPredicted RBP17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 INO80CQ6PI98 192 aaPredicted RBP17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 ZNF605Q86T29 641 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 GPR156Q8NFN8 814 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 OR56A4Q8NGH8 313 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 ATL2Q8NHH9 583 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 CCDC97Q96F63 343 aaPredicted RBP17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 LRRN3Q9H3W5 708 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 DGKBQ9Y6T7 804 aa17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 SETXQ7Z333 2677 aaKnown RBP17.16■□□□□ 0.34
RPUSD4-207ENST00000532800 CFAP69A5D8W1 941 aa17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 TMEM191CA6NGB0 347 aa17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 EIF3CLB5ME19 914 aaKnown RBP17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 AGRPO00253 132 aa17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 TRAFD1O14545 582 aaPredicted RBP17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 UGT1A5P35504 534 aa17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 MLLT3P42568 568 aaPredicted RBP17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 SCNN1BP51168 640 aa17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 INHBCP55103 352 aa17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 IL10RBQ08334 325 aa17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 ZSCAN23Q3MJ62 389 aa17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 DPPA4Q7L190 304 aa17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 RAB11FIP2Q7L804 512 aa17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 TAF8Q7Z7C8 310 aa17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 FBXO39Q8N4B4 442 aa17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 PAF1Q8N7H5 531 aa17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 Q8N9G6 341 aaPredicted RBP17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 CCL4L1Q8NHW4 92 aa17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 EIF3CQ99613 913 aaKnown RBP17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 LGR4Q9BXB1 951 aa17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 TMEM168Q9H0V1 697 aa17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 WDR70Q9NW82 654 aa17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 ATXN7L1Q9ULK2 861 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms