RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 LIG3P49916 1009 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 OTUD4Q01804 1114 aaKnown RBP14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 ITKQ08881 620 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 OVGP1Q12889 678 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 TPRG1LQ5T0D9 272 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 IL27RAQ6UWB1 636 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 ZC3H18Q86VM9 953 aaKnown RBP14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 REXO1L1PQ8IX06 675 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 SLC22A18ASQ8N1D0 253 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 OR13H1Q8NG92 308 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 TFB1MQ8WVM0 346 aaKnown RBP14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 SCRN2Q96FV2 425 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 IMP4Q96G21 291 aaKnown RBP14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 AGAP3Q96P47 875 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 QKIQ96PU8 341 aaKnown RBP eCLIP14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 TRIB3Q96RU7 358 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 TDRD1Q9BXT4 1180 aaKnown RBP14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 SLC25A51Q9H1U9 297 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 C10orf88Q9H8K7 445 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 ERVMER34-1Q9H9K5 563 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 GLOD4Q9HC38 313 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 LZTFL1Q9NQ48 299 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 B4GALT6Q9UBX8 382 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 COQ6Q9Y2Z9 468 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 SPTBN2O15020 2390 aa14.01□□□□□ -0.17
TSPAN4-220ENST00000532375 CACNA1AO00555 2505 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 A0A0U1RQS6 177 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 A0A1B0GTQ1 180 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 HACD1B0YJ81 288 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 CPP00450 1065 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 LHCGRP22888 699 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 XPAP23025 273 aaPredicted RBP14□□□□□ -0.17
TSPAN4-220ENST00000532375 AKT2P31751 481 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 IGFALSP35858 605 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 CD86P42081 329 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 RXRGP48443 463 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 PFN3P60673 137 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 FAM193AP78312 1265 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 SGCGQ13326 291 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 SLC14A1Q13336 389 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 CDKN3Q16667 212 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 WSCD2Q2TBF2 565 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 UAP1L1Q3KQV9 507 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 SLC45A4Q5BKX6 768 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 ARMC12Q5T9G4 340 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 ERAP2Q6P179 960 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 KANSL1Q7Z3B3 1105 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 ZNF567Q8N184 647 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 UBL4BQ8N7F7 174 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 DENND6BQ8NEG7 585 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 CXorf40AQ8TE69 158 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 HTR3CQ8WXA8 447 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 FUBP1Q96AE4 644 aaKnown RBP14□□□□□ -0.17
TSPAN4-220ENST00000532375 KLHDC7BQ96G42 594 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 TLR10Q9BXR5 811 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 USP29Q9HBJ7 922 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 TM7SF3Q9NS93 570 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 CHKBQ9Y259 395 aa14□□□□□ -0.17
TSPAN4-220ENST00000532375 A0A0J9YYE9 177 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 NPIPB15A6NHN6 443 aaPredicted RBP13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 A8MX80 341 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 OPHN1O60890 802 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 CBFA2T3O75081 653 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 HEXIM1O94992 359 aaKnown RBP13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 TJP3O95049 919 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 CER1O95813 267 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 TRBC1P01850 177 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 ALPIP09923 528 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 THEGLP0DJG4 465 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 CSRP1P21291 193 aaKnown RBP13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 RBL1P28749 1068 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 HNF1BP35680 557 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 ATXN3P54252 364 aaPredicted RBP13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 C21orf59P57076 290 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 SLC14A2Q15849 920 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 CNGA3Q16281 694 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 CFAP58Q5T655 872 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 KYAT3Q6YP21 454 aaKnown RBP13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 Q6ZSR6 202 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 ADAT2Q7Z6V5 191 aaKnown RBP13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 TSPAN33Q86UF1 283 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 PELI3Q8N2H9 469 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 SPATA22Q8NHS9 363 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 FAM174AQ8TBP5 190 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 PDCD6IPQ8WUM4 868 aaKnown RBP13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 COQ10AQ96MF6 247 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 ELF4Q99607 663 aaPredicted RBP13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 FAM118BQ9BPY3 351 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 GORASP1Q9BQQ3 440 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 PCDH9Q9HC56 1237 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 SEPT10Q9P0V9 454 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 R3HDM2Q9Y2K5 976 aaKnown RBP13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 PCDHGB2Q9Y5G2 931 aa13.99□□□□□ -0.17
TSPAN4-220ENST00000532375 PCDHGA12O60330 932 aa13.98□□□□□ -0.17
TSPAN4-220ENST00000532375 RECQL5O94762 991 aaPredicted RBP13.98□□□□□ -0.17
TSPAN4-220ENST00000532375 MT-CYBP00156 380 aaPredicted RBP13.98□□□□□ -0.17
TSPAN4-220ENST00000532375 RBP3P10745 1247 aa13.98□□□□□ -0.17
TSPAN4-220ENST00000532375 CTPS1P17812 591 aa13.98□□□□□ -0.17
TSPAN4-220ENST00000532375 VIPR1P32241 457 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms