RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 TCEA3O75764 348 aa22.4■■□□□ 1.18
TRAPPC4-210ENST00000531290 RECQL5O94762 991 aaPredicted RBP22.4■■□□□ 1.18
TRAPPC4-210ENST00000531290 TNFP01375 233 aa22.4■■□□□ 1.18
TRAPPC4-210ENST00000531290 ELFN1P0C7U0 828 aa22.4■■□□□ 1.18
TRAPPC4-210ENST00000531290 PIGHQ14442 188 aaPredicted RBP22.4■■□□□ 1.18
TRAPPC4-210ENST00000531290 DPYSL2Q16555 572 aa22.4■■□□□ 1.18
TRAPPC4-210ENST00000531290 SMTNL2Q2TAL5 461 aa22.4■■□□□ 1.18
TRAPPC4-210ENST00000531290 PERM1Q5SV97 790 aa22.4■■□□□ 1.18
TRAPPC4-210ENST00000531290 TMCO4Q5TGY1 634 aa22.4■■□□□ 1.18
TRAPPC4-210ENST00000531290 TMCO3Q6UWJ1 677 aa22.4■■□□□ 1.18
TRAPPC4-210ENST00000531290 GKN2Q86XP6 184 aa22.4■■□□□ 1.18
TRAPPC4-210ENST00000531290 WDR92Q96MX6 357 aa22.4■■□□□ 1.18
TRAPPC4-210ENST00000531290 CBX8Q9HC52 389 aa22.4■■□□□ 1.18
TRAPPC4-210ENST00000531290 RAI2Q9Y5P3 530 aa22.4■■□□□ 1.18
TRAPPC4-210ENST00000531290 ATRXP46100 2492 aa22.4■■□□□ 1.18
TRAPPC4-210ENST00000531290 CACNB4O00305 520 aaPredicted RBP22.39■■□□□ 1.17
TRAPPC4-210ENST00000531290 DXOO77932 396 aaKnown RBP22.39■■□□□ 1.17
TRAPPC4-210ENST00000531290 CELA2BP08218 269 aaPredicted RBP22.39■■□□□ 1.17
TRAPPC4-210ENST00000531290 AMPD1P23109 780 aa22.39■■□□□ 1.17
TRAPPC4-210ENST00000531290 IL1R2P27930 398 aa22.39■■□□□ 1.17
TRAPPC4-210ENST00000531290 RBMS1P29558 406 aaKnown RBP22.39■■□□□ 1.17
TRAPPC4-210ENST00000531290 PCBP4P57723 403 aaKnown RBP22.39■■□□□ 1.17
TRAPPC4-210ENST00000531290 ERVPABLB-1P60509 514 aa22.39■■□□□ 1.17
TRAPPC4-210ENST00000531290 SLC10A7Q0GE19 358 aa22.39■■□□□ 1.17
TRAPPC4-210ENST00000531290 ZNF235Q14590 738 aa22.39■■□□□ 1.17
TRAPPC4-210ENST00000531290 TCEA2Q15560 299 aa22.39■■□□□ 1.17
TRAPPC4-210ENST00000531290 LIPIQ6XZB0 460 aa22.39■■□□□ 1.17
TRAPPC4-210ENST00000531290 TP53INP2Q8IXH6 220 aa22.39■■□□□ 1.17
TRAPPC4-210ENST00000531290 BBS5Q8N3I7 341 aa22.39■■□□□ 1.17
TRAPPC4-210ENST00000531290 ARL10Q8N8L6 244 aa22.39■■□□□ 1.17
TRAPPC4-210ENST00000531290 SYN2Q92777 582 aaPredicted RBP22.39■■□□□ 1.17
TRAPPC4-210ENST00000531290 NAF1Q96HR8 494 aaKnown RBP22.39■■□□□ 1.17
TRAPPC4-210ENST00000531290 CCDC3Q9BQI4 270 aa22.39■■□□□ 1.17
TRAPPC4-210ENST00000531290 PRORYQ9H606 182 aa22.39■■□□□ 1.17
TRAPPC4-210ENST00000531290 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.39■■□□□ 1.17
TRAPPC4-210ENST00000531290 SIRPGQ9P1W8 387 aa22.39■■□□□ 1.17
TRAPPC4-210ENST00000531290 CHD5Q8TDI0 1954 aa22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 A8MX80 341 aa22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 TRAFD1O14545 582 aaPredicted RBP22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 KELP23276 732 aa22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 HSPA9P38646 679 aaKnown RBP22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 FANCCQ00597 558 aa22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 RALGDSQ12967 914 aa22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 DPPA4Q7L190 304 aa22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 POLNQ7Z5Q5 900 aa22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 LUZP1Q86V48 1076 aa22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 SPACA3Q8IXA5 215 aa22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 PLA2G15Q8NCC3 412 aa22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 PCDH19Q8TAB3 1148 aa22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 NSMCE1Q8WV22 266 aa22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 ATXN7L3BQ96GX2 97 aa22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 FCRL3Q96P31 734 aaPredicted RBP22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 BBC3Q96PG8 261 aaPredicted RBP22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 UBL7Q96S82 380 aaPredicted RBP22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 SYNDIG1Q9H7V2 258 aa22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 THSD1Q9NS62 852 aa22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 GPR34Q9UPC5 381 aa22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 SATB2Q9UPW6 733 aa22.38■■□□□ 1.17
TRAPPC4-210ENST00000531290 A0A1W2PQ67 120 aa22.37■■□□□ 1.17
TRAPPC4-210ENST00000531290 A0A1W2PQJ5 194 aa22.37■■□□□ 1.17
TRAPPC4-210ENST00000531290 RARAP10276 462 aa22.37■■□□□ 1.17
TRAPPC4-210ENST00000531290 UBASH3AP57075 661 aa22.37■■□□□ 1.17
TRAPPC4-210ENST00000531290 TLE3Q04726 772 aa22.37■■□□□ 1.17
TRAPPC4-210ENST00000531290 SPIDRQ14159 915 aa22.37■■□□□ 1.17
TRAPPC4-210ENST00000531290 ACOX1Q15067 660 aa22.37■■□□□ 1.17
TRAPPC4-210ENST00000531290 C3orf38Q5JPI3 329 aa22.37■■□□□ 1.17
TRAPPC4-210ENST00000531290 PDCD6IPQ8WUM4 868 aaKnown RBP22.37■■□□□ 1.17
TRAPPC4-210ENST00000531290 HIC2Q96JB3 615 aa22.37■■□□□ 1.17
TRAPPC4-210ENST00000531290 CSPG4P5Q96PW8 444 aa22.37■■□□□ 1.17
TRAPPC4-210ENST00000531290 IP6K2Q9UHH9 426 aa22.37■■□□□ 1.17
TRAPPC4-210ENST00000531290 ENTPD2Q9Y5L3 495 aa22.37■■□□□ 1.17
TRAPPC4-210ENST00000531290 DGKBQ9Y6T7 804 aa22.37■■□□□ 1.17
TRAPPC4-210ENST00000531290 TTC24A2A3L6 582 aaPredicted RBP22.36■■□□□ 1.17
TRAPPC4-210ENST00000531290 SERPING1P05155 500 aa22.36■■□□□ 1.17
TRAPPC4-210ENST00000531290 TCF4P15884 667 aa22.36■■□□□ 1.17
TRAPPC4-210ENST00000531290 NFKBIAP25963 317 aa22.36■■□□□ 1.17
TRAPPC4-210ENST00000531290 NFKBIBQ15653 356 aa22.36■■□□□ 1.17
TRAPPC4-210ENST00000531290 BROXQ5VW32 411 aa22.36■■□□□ 1.17
TRAPPC4-210ENST00000531290 HGSNATQ68CP4 663 aa22.36■■□□□ 1.17
TRAPPC4-210ENST00000531290 OR6C4Q8NGE1 309 aa22.36■■□□□ 1.17
TRAPPC4-210ENST00000531290 OR56A4Q8NGH8 313 aa22.36■■□□□ 1.17
TRAPPC4-210ENST00000531290 CPLX3Q8WVH0 158 aa22.36■■□□□ 1.17
TRAPPC4-210ENST00000531290 TEKT4Q8WW24 435 aa22.36■■□□□ 1.17
TRAPPC4-210ENST00000531290 FUBP1Q96AE4 644 aaKnown RBP22.36■■□□□ 1.17
TRAPPC4-210ENST00000531290 RBM15Q96T37 977 aaKnown RBP eCLIP22.36■■□□□ 1.17
TRAPPC4-210ENST00000531290 THAP2Q9H0W7 228 aa22.36■■□□□ 1.17
TRAPPC4-210ENST00000531290 ETNK2Q9NVF9 386 aa22.36■■□□□ 1.17
TRAPPC4-210ENST00000531290 ANAPC7Q9UJX3 599 aa22.36■■□□□ 1.17
TRAPPC4-210ENST00000531290 PCDHGC4Q9Y5F7 938 aa22.36■■□□□ 1.17
TRAPPC4-210ENST00000531290 PDE2AO00408 941 aaPredicted RBP22.35■■□□□ 1.17
TRAPPC4-210ENST00000531290 SOCS5O75159 536 aa22.35■■□□□ 1.17
TRAPPC4-210ENST00000531290 HOXC4P09017 264 aaPredicted RBP22.35■■□□□ 1.17
TRAPPC4-210ENST00000531290 SERPINB6P35237 376 aa22.35■■□□□ 1.17
TRAPPC4-210ENST00000531290 SSR1P43307 286 aaKnown RBP22.35■■□□□ 1.17
TRAPPC4-210ENST00000531290 KIAA1024LP59773 190 aa22.35■■□□□ 1.17
TRAPPC4-210ENST00000531290 ZBED6P86452 979 aa22.35■■□□□ 1.17
TRAPPC4-210ENST00000531290 KRT81Q14533 505 aa22.35■■□□□ 1.17
TRAPPC4-210ENST00000531290 FOXR1Q6PIV2 292 aa22.35■■□□□ 1.17
TRAPPC4-210ENST00000531290 GPR155Q7Z3F1 870 aa22.35■■□□□ 1.17
TRAPPC4-210ENST00000531290 ATPAF2Q8N5M1 289 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms