RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 ITGB2P05107 769 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 LIPCP11150 499 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 RHOQP17081 205 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 ADRA1BP35368 520 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 INHBCP55103 352 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 SNRPD1P62314 119 aaKnown RBP9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 TLE1Q04724 770 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 ZFP36L1Q07352 338 aaKnown RBP9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 CLCA4Q14CN2 919 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 CCDC14Q49A88 953 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 ACBD5Q5T8D3 534 aaPredicted RBP9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 TAF3Q5VWG9 929 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 ESRP1Q6NXG1 681 aaKnown RBP9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 ARCQ7LC44 396 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 PHLDB2Q86SQ0 1253 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 TTC7BQ86TV6 843 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 ZFAND4Q86XD8 727 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 JAMLQ86YT9 394 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 HID1Q8IV36 788 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 SLITRK4Q8IW52 837 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 PELI3Q8N2H9 469 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 FSTL5Q8N475 847 aaPredicted RBP9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 PLA2G15Q8NCC3 412 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 WDR48Q8TAF3 677 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 SLC20A1Q8WUM9 679 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 UBE2Q2Q8WVN8 375 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 CPA5Q8WXQ8 436 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 GLMNQ92990 594 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 SGF29Q96ES7 293 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 EXOC2Q96KP1 924 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 PANX2Q96RD6 677 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 GFM1Q96RP9 751 aaKnown RBP9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 OSBPL1AQ9BXW6 950 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 TTYH3Q9C0H2 523 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 LRRN3Q9H3W5 708 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 LRRC4CQ9HCJ2 640 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 METTL5Q9NRN9 209 aaKnown RBP9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 NOCTQ9UK39 431 aaKnown RBP9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 LOXL2Q9Y4K0 774 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 ICE1Q9Y2F5 2266 aa9.28□□□□□ -0.92
CHMP4A-205ENST00000531158 TSPAN11A1L157 253 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 TMEM202A6NGA9 273 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 NVLO15381 856 aaKnown RBP9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 KDELR3O43731 214 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 POP4O95707 220 aaKnown RBP9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 PRKCGP05129 697 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 MMEP08473 750 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 GM2AP17900 193 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 POU3F2P20265 443 aaPredicted RBP9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 CDK11BP21127 795 aaKnown RBP9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 FECHP22830 423 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 PBX1P40424 430 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 MAPKAPK2P49137 400 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 HDAC4P56524 1084 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 SNX16P57768 344 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 ETF1P62495 437 aaKnown RBP9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 EIF3IQ13347 325 aaKnown RBP9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 TRIM14Q14142 442 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 INPP5AQ14642 412 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 NFATC4Q14934 902 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 NR1I3Q14994 352 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 C16orf72Q14CZ0 275 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 POLD3Q15054 466 aaPredicted RBP9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 ELOCQ15369 112 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 TBR1Q16650 682 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 CDO1Q16878 200 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 TMEM52BQ4KMG9 183 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 FILIP1LQ4L180 1135 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 CERCAMQ5T4B2 595 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 NAA35Q5VZE5 725 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 SMYD5Q6GMV2 418 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 RWDD4Q6NW29 188 aaKnown RBP9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 LVRNQ6Q4G3 990 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 USP53Q70EK8 1073 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 APTXQ7Z2E3 356 aaKnown RBP9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 RD3Q7Z3Z2 195 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 SPRED1Q7Z699 444 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 CREBRFQ8IUR6 639 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 CCNJLQ8IV13 435 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 PYROXD2Q8N2H3 581 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 CCL4L1Q8NHW4 92 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 EPS8L1Q8TE68 723 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 CXorf40AQ8TE69 158 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 OR1E3Q8WZA6 343 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 ARHGEF26Q96DR7 871 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 NSMCE3Q96MG7 304 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 GDAP1L1Q96MZ0 367 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 PHF12Q96QT6 1004 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 RBM15Q96T37 977 aaKnown RBP eCLIP9.27□□□□□ -0.933e-9■■□□□ 11.8
CHMP4A-205ENST00000531158 MAGEH1Q9H213 219 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 SEMA6CQ9H3T2 930 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 FGF22Q9HCT0 170 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 MRPL40Q9NQ50 206 aaKnown RBP9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 WDR70Q9NW82 654 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 DKK3Q9UBP4 350 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 GPR34Q9UPC5 381 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 MFHAS1Q9Y4C4 1052 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 RNF215Q9Y6U7 377 aa9.27□□□□□ -0.93
CHMP4A-205ENST00000531158 C2CD4BA6NLJ0 364 aa9.26□□□□□ -0.93
CHMP4A-205ENST00000531158 F8VZ95 297 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms