RNA–Protein interactions for RNA: ENST00000530983.5

VPS28-213, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,337 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-213ENST00000530983 LPGAT1Q92604 370 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 SLCO4A1Q96BD0 722 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 DNAJC1Q96KC8 554 aaKnown RBP19.35■□□□□ 0.69
VPS28-213ENST00000530983 NOL6Q9H6R4 1146 aaKnown RBP19.35■□□□□ 0.69
VPS28-213ENST00000530983 ATP13A1Q9HD20 1204 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 SPAG4Q9NPE6 437 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 MRPL40Q9NQ50 206 aaKnown RBP19.35■□□□□ 0.69
VPS28-213ENST00000530983 DNAAF2Q9NVR5 837 aaKnown RBP19.35■□□□□ 0.69
VPS28-213ENST00000530983 PTTG2Q9NZH5 202 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 GIT1Q9Y2X7 761 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 HS3ST4Q9Y661 456 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 MYO16Q9Y6X6 1858 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 C7orf72A4D263 438 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 B3GAT3O94766 335 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 RBP1P09455 135 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 SCNN1BP51168 640 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 SLC5A3P53794 718 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 ACAP2Q15057 778 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 NRF1Q16656 503 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 HECTD2Q5U5R9 776 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 CD300LGQ6UXG3 332 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 LRTOMTQ8WZ04 291 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 AP5M1Q9H0R1 490 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 SLC25A51Q9H1U9 297 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 OSER1Q9NX31 292 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 CD300AQ9UGN4 299 aa19.35■□□□□ 0.69
VPS28-213ENST00000530983 CEP350Q5VT06 3117 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 CSPG5O95196 566 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 CYP11A1P05108 521 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 SNRPB2P08579 225 aaKnown RBP19.34■□□□□ 0.69
VPS28-213ENST00000530983 YWHAQP27348 245 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 MAP2K5Q13163 448 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 MYLK3Q32MK0 819 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 C6orf10Q5SRN2 563 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 TMEM207Q6UWW9 146 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 SCD5Q86SK9 330 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 METTL23Q86XA0 190 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 CILP2Q8IUL8 1156 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 CHERPQ8IWX8 916 aaKnown RBP19.34■□□□□ 0.69
VPS28-213ENST00000530983 OR9I1Q8NGQ6 314 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 SENP6Q9GZR1 1112 aaPredicted RBP19.34■□□□□ 0.69
VPS28-213ENST00000530983 MTF2Q9Y483 593 aaPredicted RBP19.34■□□□□ 0.69
VPS28-213ENST00000530983 TDRD15B5MCY1 1934 aaKnown RBP19.34■□□□□ 0.69
VPS28-213ENST00000530983 M0QZ92 97 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 CTSHP09668 335 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 KCNC1P48547 511 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 SERPINH1P50454 418 aaKnown RBP19.34■□□□□ 0.69
VPS28-213ENST00000530983 CLEC6AQ6EIG7 209 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 C8orf82Q6P1X6 216 aaPredicted RBP19.34■□□□□ 0.69
VPS28-213ENST00000530983 TRIM74Q86UV6 250 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 TRIM73Q86UV7 250 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 KLHL23Q8NBE8 558 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 ZFP28Q8NHY6 868 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 TSPAN17Q96FV3 270 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 IMP4Q96G21 291 aaKnown RBP19.34■□□□□ 0.69
VPS28-213ENST00000530983 ZNF597Q96LX8 424 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 COQ10BQ9H8M1 238 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 TRAF6Q9Y4K3 522 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 TRPV2Q9Y5S1 764 aa19.34■□□□□ 0.69
VPS28-213ENST00000530983 A0A1B0GTW7 788 aa19.33■□□□□ 0.69
VPS28-213ENST00000530983 TCRBV3S1A0A5B6 114 aa19.33■□□□□ 0.69
VPS28-213ENST00000530983 TNFRSF10BO14763 440 aa19.33■□□□□ 0.69
VPS28-213ENST00000530983 MRASO14807 208 aa19.33■□□□□ 0.69
VPS28-213ENST00000530983 GPC4O75487 556 aa19.33■□□□□ 0.69
VPS28-213ENST00000530983 WISP3O95389 354 aaPredicted RBP19.33■□□□□ 0.69
VPS28-213ENST00000530983 MT-CO1P00395 513 aa19.33■□□□□ 0.69
VPS28-213ENST00000530983 POMCP01189 267 aa19.33■□□□□ 0.69
VPS28-213ENST00000530983 CDKN2DP55273 166 aa19.33■□□□□ 0.69
VPS28-213ENST00000530983 TRAP1Q12931 704 aaKnown RBP19.33■□□□□ 0.69
VPS28-213ENST00000530983 IHHQ14623 411 aa19.33■□□□□ 0.69
VPS28-213ENST00000530983 FSCN1Q16658 493 aaKnown RBP19.33■□□□□ 0.69
VPS28-213ENST00000530983 LDB1Q86U70 411 aaPredicted RBP19.33■□□□□ 0.69
VPS28-213ENST00000530983 SLC22A9Q8IVM8 553 aa19.33■□□□□ 0.69
VPS28-213ENST00000530983 RANBP9Q96S59 729 aa19.33■□□□□ 0.69
VPS28-213ENST00000530983 SLC25A23Q9BV35 468 aa19.33■□□□□ 0.69
VPS28-213ENST00000530983 TMEM181Q9P2C4 612 aa19.33■□□□□ 0.69
VPS28-213ENST00000530983 VWA7Q9Y334 891 aa19.33■□□□□ 0.69
VPS28-213ENST00000530983 DOCK4Q8N1I0 1966 aa19.33■□□□□ 0.68
VPS28-213ENST00000530983 ATP6AP2A0A1C7CYW4 349 aa19.33■□□□□ 0.68
VPS28-213ENST00000530983 IQCA1LA6NCM1 817 aa19.33■□□□□ 0.68
VPS28-213ENST00000530983 H0YJX3 145 aa19.33■□□□□ 0.68
VPS28-213ENST00000530983 CCL22O00626 93 aa19.33■□□□□ 0.68
VPS28-213ENST00000530983 ATP6AP2O75787 350 aa19.33■□□□□ 0.68
VPS28-213ENST00000530983 TMCC1O94876 653 aa19.33■□□□□ 0.68
VPS28-213ENST00000530983 PSMC3P17980 439 aa19.33■□□□□ 0.68
VPS28-213ENST00000530983 TSPAN8P19075 237 aa19.33■□□□□ 0.68
VPS28-213ENST00000530983 IMPDH1P20839 514 aa19.33■□□□□ 0.68
VPS28-213ENST00000530983 MAXP61244 160 aa19.33■□□□□ 0.68
VPS28-213ENST00000530983 CYP2R1Q6VVX0 501 aa19.33■□□□□ 0.68
VPS28-213ENST00000530983 LARP4Q71RC2 724 aaKnown RBP eCLIP19.33■□□□□ 0.68
VPS28-213ENST00000530983 LRRC49Q8IUZ0 686 aa19.33■□□□□ 0.68
VPS28-213ENST00000530983 SH3RF2Q8TEC5 729 aa19.33■□□□□ 0.68
VPS28-213ENST00000530983 ALG9Q9H6U8 611 aa19.33■□□□□ 0.68
VPS28-213ENST00000530983 NMUR1Q9HB89 426 aa19.33■□□□□ 0.68
VPS28-213ENST00000530983 FBRSL1Q9HCM7 1045 aaKnown RBP19.33■□□□□ 0.68
VPS28-213ENST00000530983 RNF11Q9Y3C5 154 aa19.33■□□□□ 0.68
VPS28-213ENST00000530983 NRP2O60462 931 aa19.32■□□□□ 0.68
VPS28-213ENST00000530983 CHRNA1P02708 482 aa19.32■□□□□ 0.68
VPS28-213ENST00000530983 FGFR3P22607 806 aa19.32■□□□□ 0.68
VPS28-213ENST00000530983 CD86P42081 329 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms