RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 PDHA1P08559 390 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 THEGLP0DJG4 465 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 C6P13671 934 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 CSRP1P21291 193 aaKnown RBP12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 NFKBIAP25963 317 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 LIG3P49916 1009 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 RALGDSQ12967 914 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 XRCC4Q13426 336 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 TEX44Q53QW1 395 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 PRAMEF14Q5SWL7 426 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 FAM182AQ5T1J6 154 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 LIPIQ6XZB0 460 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 DBX2Q6ZNG2 339 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 Q6ZSR6 202 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 DPPA4Q7L190 304 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 DGLUCYQ7Z3D6 616 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 PIP4P1Q86T03 277 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 ZC3H18Q86VM9 953 aaKnown RBP12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 OR13H1Q8NG92 308 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 HAUS1Q96CS2 278 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 SCRN2Q96FV2 425 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 AGAP3Q96P47 875 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 ELF4Q99607 663 aaPredicted RBP12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 C1QTNF7Q9BXJ2 289 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 CEP41Q9BYV8 373 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 LZTFL1Q9NQ48 299 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 TM7SF3Q9NS93 570 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 SEPT10Q9P0V9 454 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 COQ6Q9Y2Z9 468 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 PCDHGB2Q9Y5G2 931 aa12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 TP53BP1Q12888 1972 aaPredicted RBP12.74□□□□□ -0.37
CCDC90B-216ENST00000529856 A0A1B0GTQ1 180 aa12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 A6NNZ2 444 aa12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 A8MX80 341 aa12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 MTSS1O43312 755 aa12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 TJP3O95049 919 aa12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 PRLP01236 227 aa12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 PTPN3P26045 913 aa12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 RXRGP48443 463 aa12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 SKOR1P84550 965 aa12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 WASHC5Q12768 1159 aa12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 ZNF211Q13398 564 aaPredicted RBP12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 AGERQ15109 404 aa12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 NOMO1Q15155 1222 aa12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 CCDC181Q5TID7 509 aa12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 KYAT3Q6YP21 454 aaKnown RBP12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 DCP2Q8IU60 420 aaKnown RBP12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 CBARPQ8N350 705 aaPredicted RBP12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 TP53I13Q8NBR0 393 aaPredicted RBP12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 IMP4Q96G21 291 aaKnown RBP12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 TEKT5Q96M29 485 aa12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 QKIQ96PU8 341 aaKnown RBP eCLIP12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 MCCC1Q96RQ3 725 aaPredicted RBP12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 TDRD1Q9BXT4 1180 aaKnown RBP12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 SLC25A51Q9H1U9 297 aa12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 GLOD4Q9HC38 313 aa12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 GPR27Q9NS67 375 aa12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 B4GALT6Q9UBX8 382 aa12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 CHKBQ9Y259 395 aa12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 PPP2R2CQ9Y2T4 447 aa12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 CABIN1Q9Y6J0 2220 aa12.73□□□□□ -0.37
CCDC90B-216ENST00000529856 DNAH14Q0VDD8 3507 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 H7C0C1 242 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 SH3BP5O60239 455 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 LZTS3O60299 673 aaPredicted RBP12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 PCDHGA12O60330 932 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 KCNK5O95279 499 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 ELFN1P0C7U0 828 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 CYP2A6P11509 494 aaPredicted RBP12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 CA4P22748 312 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 VIPR1P32241 457 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 CD86P42081 329 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 RABIFP47224 123 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 ATP5OP48047 213 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 ARRB1P49407 418 aaPredicted RBP12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 CCT8P50990 548 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 PFN3P60673 137 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 RPL26P61254 145 aaKnown RBP12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 OTUD4Q01804 1114 aaKnown RBP12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 SUZ12Q15022 739 aaKnown RBP12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 LRRC14Q15048 493 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 SHBQ15464 509 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 WSCD2Q2TBF2 565 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 MEI1Q5TIA1 1274 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 PTAR1Q7Z6K3 402 aaPredicted RBP12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 NDUFAF2Q8N183 169 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 SLC22A18ASQ8N1D0 253 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 OXR1Q8N573 874 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 ACTL9Q8TC94 416 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 HTR3CQ8WXA8 447 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 ANP32BQ92688 251 aaKnown RBP12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 TADA1Q96BN2 335 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 VAT1Q99536 393 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 PCDH9Q9HC56 1237 aa12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 MBNL1Q9NR56 388 aaKnown RBP12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 RPL26L1Q9UNX3 145 aaKnown RBP12.72□□□□□ -0.37
CCDC90B-216ENST00000529856 PCNX2A6NKB5 2137 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 A0A0J9YYE9 177 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 SPTY2D1-AS1A0A0U1RR47 76 aa12.71□□□□□ -0.37
CCDC90B-216ENST00000529856 NPIPB15A6NHN6 443 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms