RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 PSMD11O00231 422 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 CD48P09326 243 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 JUNDP17535 347 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 GM2AP17900 193 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 NFKBIAP25963 317 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 TRIM23P36406 574 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 GARSP41250 739 aaKnown RBP12.12□□□□□ -0.47
COPB1-206ENST00000529210 BLKP51451 505 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 KRT81Q14533 505 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 TSR1Q2NL82 804 aaKnown RBP12.12□□□□□ -0.47
COPB1-206ENST00000529210 ANKRD20A8PQ5CZ79 823 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 HES3Q5TGS1 186 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 MARC1Q5VT66 337 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 NCBP2-AS2Q69YL0 99 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 TIGD7Q6NT04 549 aaPredicted RBP12.12□□□□□ -0.47
COPB1-206ENST00000529210 LVRNQ6Q4G3 990 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 CNGA4Q8IV77 575 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 RHOT2Q8IXI1 618 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 DCBLD1Q8N8Z6 715 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 NSMCE1Q8WV22 266 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 MCCC1Q96RQ3 725 aaPredicted RBP12.12□□□□□ -0.47
COPB1-206ENST00000529210 CHP1Q99653 195 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 BOCQ9BWV1 1114 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 NRSN2Q9GZP1 204 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 SPASTQ9UBP0 616 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 APOBEC3BQ9UH17 382 aaKnown RBP12.12□□□□□ -0.47
COPB1-206ENST00000529210 CELSR3Q9NYQ7 3312 aa12.12□□□□□ -0.47
COPB1-206ENST00000529210 COL27A1Q8IZC6 1860 aaPredicted RBP12.11□□□□□ -0.47
COPB1-206ENST00000529210 EME2A4GXA9 379 aaPredicted RBP12.11□□□□□ -0.47
COPB1-206ENST00000529210 MATN3O15232 486 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 MFSD11O43934 449 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 AKR1B10O60218 316 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 FZD6O60353 706 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 RECQL5O94762 991 aaPredicted RBP12.11□□□□□ -0.47
COPB1-206ENST00000529210 ELFN1P0C7U0 828 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 JUPP14923 745 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 CES1P23141 567 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 CCNCP24863 283 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 MMP13P45452 471 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 HK3P52790 923 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 TAS2R40P59535 323 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 KIAA1024LP59773 190 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 DAB2P98082 770 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 INSM1Q01101 510 aaPredicted RBP12.11□□□□□ -0.47
COPB1-206ENST00000529210 MMRN1Q13201 1228 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 NFATC4Q14934 902 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 RTP5Q14D33 572 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 ATP13A4Q4VNC1 1196 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 ZNF542PQ5EBM4 170 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 LRRC38Q5VT99 294 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 CDCP2Q5VXM1 449 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 ESRP1Q6NXG1 681 aaKnown RBP12.11□□□□□ -0.47
COPB1-206ENST00000529210 RAVER1Q8IY67 606 aaKnown RBP12.11□□□□□ -0.47
COPB1-206ENST00000529210 PHACTR4Q8IZ21 702 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 FSTL5Q8N475 847 aaPredicted RBP12.11□□□□□ -0.47
COPB1-206ENST00000529210 KCTD6Q8NC69 237 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 ATL2Q8NHH9 583 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 CCDC42Q96M95 316 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 COQ10AQ96MF6 247 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 APOOQ9BUR5 198 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 LRRC61Q9BV99 259 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 SLC13A1Q9BZW2 595 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 DEF6Q9H4E7 631 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 CAAP1Q9H8G2 361 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 NHEJ1Q9H9Q4 299 aaPredicted RBP12.11□□□□□ -0.47
COPB1-206ENST00000529210 NOD2Q9HC29 1040 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 SCUBE2Q9NQ36 999 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 PHTF1Q9UMS5 762 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 COQ6Q9Y2Z9 468 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 DGKBQ9Y6T7 804 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 FAM208BQ5VWN6 2430 aa12.11□□□□□ -0.47
COPB1-206ENST00000529210 FAM149AA5PLN7 773 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 TNFRSF10CO14798 259 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 FFAR2O15552 330 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 GCATO75600 419 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 NEBLO76041 1014 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 MX2P20592 715 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 KDELR1P24390 212 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 HTR1BP28222 390 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 TEAD1P28347 426 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 HADHBP55084 474 aaKnown RBP12.1□□□□□ -0.47
COPB1-206ENST00000529210 PPARDQ03181 441 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 TRAF2Q12933 501 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 INPP5AQ14642 412 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 IFI16Q16666 785 aaKnown RBP12.1□□□□□ -0.47
COPB1-206ENST00000529210 C6orf132Q5T0Z8 1188 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 KDM7AQ6ZMT4 941 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 CPNE8Q86YQ8 564 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 PQLC3Q8N755 202 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 SLC35G2Q8TBE7 412 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 MDM1Q8TC05 714 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 HDAC11Q96DB2 347 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 NXPE2Q96DL1 559 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 SCRN2Q96FV2 425 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 POLR1EQ9GZS1 481 aaKnown RBP12.1□□□□□ -0.47
COPB1-206ENST00000529210 HAUS2Q9NVX0 235 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 B4GALT6Q9UBX8 382 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 CLCA2Q9UQC9 943 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 PCDHGC4Q9Y5F7 938 aa12.1□□□□□ -0.47
COPB1-206ENST00000529210 ASXL3Q9C0F0 2248 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms