RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 CEP97Q8IW35 865 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 SUGP1Q8IWZ8 645 aaKnown RBP14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 CARNMT1Q8N4J0 409 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 NXNL1Q96CM4 212 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 CDKN2AIPNLQ96HQ2 116 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 CNDP1Q96KN2 507 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 UBXN10Q96LJ8 280 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 TBATAQ96M53 351 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 FEM1AQ9BSK4 669 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 C2orf49Q9BVC5 232 aaPredicted RBP14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 TMEM106CQ9BVX2 250 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 CDH19Q9H159 772 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 ZNF395Q9H8N7 513 aaPredicted RBP14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 CATSPERZQ9NTU4 200 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 MRGBPQ9NV56 204 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 NCKIPSDQ9NZQ3 722 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 TAGLN3Q9UI15 199 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 RWDD3Q9Y3V2 267 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 TTC24A2A3L6 582 aaPredicted RBP14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 CAPN14A8MX76 684 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 F8W8V4 182 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 LYPLA1O75608 230 aaPredicted RBP14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 CBX6O95503 412 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 LPOP22079 712 aaPredicted RBP14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 AVPR1AP37288 418 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 RPL14P50914 215 aaKnown RBP14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 SGSHP51688 502 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 PLK1P53350 603 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 RPL26P61254 145 aaKnown RBP14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 AP1S1P61966 158 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 ARF5P84085 180 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 CDH18Q13634 790 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 TYSND1Q2T9J0 566 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 HSF5Q4G112 596 aaPredicted RBP14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 FSCBQ5H9T9 825 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 TXNDC8Q6A555 127 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 PIWIL4Q7Z3Z4 852 aaKnown RBP14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 TMC7Q7Z402 723 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 MFSD6LQ8IWD5 586 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 ZNF557Q8N988 423 aaPredicted RBP14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 PHOSPHO2Q8TCD6 241 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 ADAMTS19Q8TE59 1207 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 AUTS2Q8WXX7 1259 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 CYP2S1Q96SQ9 504 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 TBC1D10AQ9BXI6 508 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 LRRC3Q9BY71 257 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 NMUR2Q9GZQ4 415 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 SYTL2Q9HCH5 934 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 GPAMQ9HCL2 828 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 SMPD4Q9NXE4 827 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 KIAA1522Q9P206 1035 aaPredicted RBP14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 DNMT3BQ9UBC3 853 aaKnown RBP14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 MARCOQ9UEW3 520 aaPredicted RBP14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 VPS28Q9UK41 221 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 OR51B4Q9Y5P0 310 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 RAI2Q9Y5P3 530 aa14.82□□□□□ -0.04
ECHDC1-220ENST00000528402 MTCL1Q9Y4B5 1905 aaKnown RBP14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 CCDC162PA2VCL2 907 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 ANKRD66B4E2M5 251 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 CHUKO15111 745 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 TMCC1O94876 653 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 ATP6V1G2O95670 118 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 CYBBP04839 570 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 KRT16P08779 473 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 SBK3P0C264 359 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 ACRP10323 421 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 AOC1P19801 751 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 CD9P21926 228 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 PMLP29590 882 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 GRIA4P48058 902 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 IDH3AP50213 366 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 SUOXP51687 545 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 ARSDP51689 593 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 ZNF140P52738 457 aaPredicted RBP14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 NAA20P61599 178 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 GALNT1Q10472 559 aaPredicted RBP14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 GALNT3Q14435 633 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 WASHC2DQ5SRD0 308 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 EPGNQ6UW88 154 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 OTOP2Q7RTS6 562 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 GLT6D1Q7Z4J2 308 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 TMCO2Q7Z6W1 182 aaPredicted RBP14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 TMC8Q8IU68 726 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 TMPRSS6Q8IU80 811 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 KIF2BQ8N4N8 673 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 AFAP1L2Q8N4X5 818 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 LEMD2Q8NC56 503 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 KREMEN2Q8NCW0 462 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 CFAP61Q8NHU2 1237 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 HEXDCQ8WVB3 486 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 WBP2Q969T9 261 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 FAR2Q96K12 515 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 DNAJC1Q96KC8 554 aaKnown RBP14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 ZBED2Q9BTP6 218 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 CCDC106Q9BWC9 280 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 C1orf21Q9H246 121 aa14.81□□□□□ -0.04
ECHDC1-220ENST00000528402 EML4Q9HC35 981 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms