RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 CYP2A6P11509 494 aaPredicted RBP9.66□□□□□ -0.86
CHD7-208ENST00000528280 CKMT1AP12532 417 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 ZFXP17010 805 aaPredicted RBP9.66□□□□□ -0.86
CHD7-208ENST00000528280 CA4P22748 312 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 IL4RP24394 825 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 SLC1A1P43005 524 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 MMP13P45452 471 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 ACADVLP49748 655 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 ARSEP51690 589 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 PPARDQ03181 441 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 C19orf57Q0VDD7 668 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 TCEAL1Q15170 157 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 ELOCQ15369 112 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 ANKRD20A8PQ5CZ79 823 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 LRRC38Q5VT99 294 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 ZCCHC8Q6NZY4 707 aaKnown RBP9.66□□□□□ -0.86
CHD7-208ENST00000528280 SARM1Q6SZW1 724 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 DHRS13Q6UX07 377 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 MACC1Q6ZN28 852 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 BZW1Q7L1Q6 419 aaKnown RBP9.66□□□□□ -0.86
CHD7-208ENST00000528280 VSIG1Q86XK7 387 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 SLC22A18ASQ8N1D0 253 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 FSTL5Q8N475 847 aaPredicted RBP9.66□□□□□ -0.86
CHD7-208ENST00000528280 TEX26Q8N6G2 289 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 TP53I13Q8NBR0 393 aaPredicted RBP9.66□□□□□ -0.86
CHD7-208ENST00000528280 SLC35G2Q8TBE7 412 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 RFFLQ8WZ73 363 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 CALR3Q96L12 384 aaKnown RBP9.66□□□□□ -0.86
CHD7-208ENST00000528280 ZNF830Q96NB3 372 aaPredicted RBP9.66□□□□□ -0.86
CHD7-208ENST00000528280 TSGA13Q96PP4 275 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 MGME1Q9BQP7 344 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 APOOQ9BUR5 198 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 TRIM5Q9C035 493 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 ABCG4Q9H172 646 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 DNPEPQ9ULA0 475 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 ITM2BQ9Y287 266 aa9.66□□□□□ -0.86
CHD7-208ENST00000528280 DOCK9Q9BZ29 2069 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 PTPRBP23467 1997 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 URB1O60287 2271 aaKnown RBP9.65□□□□□ -0.86
CHD7-208ENST00000528280 MYO18BQ8IUG5 2567 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 TRABD2BA6NFA1 517 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 K7ESM1 405 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 PSMD11O00231 422 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 CACNB4O00305 520 aaPredicted RBP9.65□□□□□ -0.86
CHD7-208ENST00000528280 TRIM38O00635 465 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 TRAFD1O14545 582 aaPredicted RBP9.65□□□□□ -0.86
CHD7-208ENST00000528280 MATN3O15232 486 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 FFAR2O15552 330 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 SPINT1O43278 529 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 HTRA2O43464 458 aaPredicted RBP9.65□□□□□ -0.86
CHD7-208ENST00000528280 MFAP3LO75121 409 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 MTA2O94776 668 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 RASGRP1O95267 797 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 PEX11BO96011 259 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 TNFP01375 233 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 ANXA6P08133 673 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 ELFN1P0C7U0 828 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 C6P13671 934 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 CTSEP14091 401 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 TCF4P15884 667 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 CR2P20023 1033 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 KDELR1P24390 212 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 MMP12P39900 470 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 GARSP41250 739 aaKnown RBP9.65□□□□□ -0.86
CHD7-208ENST00000528280 ADKP55263 362 aaKnown RBP9.65□□□□□ -0.86
CHD7-208ENST00000528280 ITKQ08881 620 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 GALNT2Q10471 571 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 DNAJC3Q13217 504 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 MTM1Q13496 603 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 DPYSL3Q14195 570 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 INPP5AQ14642 412 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 MESDQ14696 234 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 WSCD2Q2TBF2 565 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 ZNF542PQ5EBM4 170 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 ARMC12Q5T9G4 340 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 ESRP1Q6NXG1 681 aaKnown RBP9.65□□□□□ -0.86
CHD7-208ENST00000528280 LIPIQ6XZB0 460 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 ARHGAP36Q6ZRI8 547 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 DPPA4Q7L190 304 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 RAVER1Q8IY67 606 aaKnown RBP9.65□□□□□ -0.86
CHD7-208ENST00000528280 CCDC170Q8IYT3 715 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 NETO2Q8NC67 525 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 RNF214Q8ND24 703 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 ZNF548Q8NEK5 533 aaPredicted RBP9.65□□□□□ -0.86
CHD7-208ENST00000528280 WDR48Q8TAF3 677 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 LMX1AQ8TE12 382 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 GRAMD1AQ96CP6 724 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 SCRN2Q96FV2 425 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 CHP1Q99653 195 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 NRSN2Q9GZP1 204 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 POLR1EQ9GZS1 481 aaKnown RBP9.65□□□□□ -0.86
CHD7-208ENST00000528280 BRD8Q9H0E9 1235 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 MBNL1Q9NR56 388 aaKnown RBP9.65□□□□□ -0.86
CHD7-208ENST00000528280 ETNK2Q9NVF9 386 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 UCKL1Q9NWZ5 548 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 DDX56Q9NY93 547 aaKnown RBP9.65□□□□□ -0.86
CHD7-208ENST00000528280 GGT7Q9UJ14 662 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 DOLKQ9UPQ8 538 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 PPIL1Q9Y3C6 166 aa9.65□□□□□ -0.86
CHD7-208ENST00000528280 LMO7DNF2Z398 122 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms