RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 WFIKKN2Q8TEU8 576 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 TOX2Q96NM4 488 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 SRRM3A6NNA2 597 aaPredicted RBP15.13■□□□□ 0.01
USP47-207ENST00000527733 M0QZQ0 153 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 BIRC5O15392 142 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 PABPC1P11940 636 aaKnown RBP15.13■□□□□ 0.01
USP47-207ENST00000527733 TGM3Q08188 693 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 CLLU1OSQ5K130 101 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 RASIP1Q5U651 963 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 BRSK1Q8TDC3 778 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 OXNAD1Q96HP4 312 aaPredicted RBP15.13■□□□□ 0.01
USP47-207ENST00000527733 SLC2A13Q96QE2 648 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 SEMA4BQ9NPR2 832 aaPredicted RBP15.13■□□□□ 0.01
USP47-207ENST00000527733 ZNF487B1APH4 448 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 INPPL1O15357 1258 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 TFE3P19532 575 aaPredicted RBP15.12■□□□□ 0.01
USP47-207ENST00000527733 FSHRP23945 695 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 PLIN5Q00G26 463 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 LRRC74AQ0VAA2 488 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 SNX30Q5VWJ9 437 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 ESRP1Q6NXG1 681 aaKnown RBP15.12■□□□□ 0.01
USP47-207ENST00000527733 ZDHHC24Q6UX98 284 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 CATSPER1Q8NEC5 780 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 TNIP2Q8NFZ5 429 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 LZICQ8WZA0 190 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 SAMD11Q96NU1 681 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 CAB39LQ9H9S4 337 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 KCNK4Q9NYG8 393 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 ZNF180Q9UJW8 692 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 PCDHB1Q9Y5F3 818 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 RREB1Q92766 1687 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 HTR1BP28222 390 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 SOX11P35716 441 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 SPAM1P38567 509 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 WASP42768 502 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 ATXN3P54252 364 aaPredicted RBP15.12■□□□□ 0.01
USP47-207ENST00000527733 IRF8Q02556 426 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 SLC10A7Q0GE19 358 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 MS4A13Q5J8X5 152 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 ADGRD1Q6QNK2 874 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 CATSPER2Q96P56 530 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 MTRRQ9UBK8 725 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 MYH9P35579 1960 aaKnown RBP15.12■□□□□ 0.01
USP47-207ENST00000527733 BRWD3Q6RI45 1802 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 NR5A2O00482 541 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 VPS4BO75351 444 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 ASLP04424 464 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 SERPINB3P29508 390 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 FLOT2Q14254 428 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 PLEKHG4Q58EX7 1191 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 TNS4Q8IZW8 715 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 NAT8LQ8N9F0 302 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 FNDC5Q8NAU1 212 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 ICA1LQ8NDH6 482 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 FEM1CQ96JP0 617 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 ING2Q9H160 280 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 IL1RAPL1Q9NZN1 696 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 STARD13Q9Y3M8 1113 aa15.12■□□□□ 0.01
USP47-207ENST00000527733 FAM32AQ9Y421 112 aaKnown RBP15.12■□□□□ 0.01
USP47-207ENST00000527733 FKBP9O95302 570 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 CTSEP14091 401 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 GRIA4P48058 902 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 NFYCQ13952 458 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 KRT72Q14CN4 511 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 DLG2Q15700 870 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 FKBP9P1Q75LS8 142 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 RPAINQ86UA6 219 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 ZNF831Q5JPB2 1677 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 COL6A2P12110 1019 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 POLD2P49005 469 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 GALNT2Q10471 571 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 MOGSQ13724 837 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 MSANTD2Q6P1R3 559 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 RGL4Q8IZJ4 473 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 PQLC3Q8N755 202 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 REPS1Q96D71 796 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 LINGO1Q96FE5 620 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 DPY30Q9C005 99 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 KIF17Q9P2E2 1029 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 TBC1D3DA0A087WVF3 549 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 TBC1D3IA0A087WXS9 549 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 TBC1D3EA0A087X179 549 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 TBC1D3KA0A087X1G2 549 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 TBC1D3FA6NER0 549 aaPredicted RBP15.11■□□□□ 0.01
USP47-207ENST00000527733 TBC1D3LB9A6J9 549 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 AKAP10O43572 662 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 TBC1D3HP0C7X1 549 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 EPB42P16452 691 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 SCTRP47872 440 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 ZNF33AQ06730 810 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 ACTN3Q08043 901 aaPredicted RBP15.11■□□□□ 0.01
USP47-207ENST00000527733 CYP2A13Q16696 494 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 CCDC142Q17RM4 750 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 ATXN7L2Q5T6C5 722 aaPredicted RBP15.11■□□□□ 0.01
USP47-207ENST00000527733 TBC1D3GQ6DHY5 549 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 TBC1D3CQ6IPX1 549 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 TBC1D3Q8IZP1 549 aaPredicted RBP15.11■□□□□ 0.01
USP47-207ENST00000527733 CELF5Q8N6W0 485 aaKnown RBP15.11■□□□□ 0.01
USP47-207ENST00000527733 FAM83DQ9H4H8 585 aa15.11■□□□□ 0.01
USP47-207ENST00000527733 ZDHHC18Q9NUE0 388 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms