RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 ARFGAP1Q8N6T3 406 aa22.51■■□□□ 1.19
TRAPPC4-208ENST00000527680 KYQ8NBH2 561 aa22.51■■□□□ 1.19
TRAPPC4-208ENST00000527680 PEBP4Q96S96 227 aa22.51■■□□□ 1.19
TRAPPC4-208ENST00000527680 RTN4Q9NQC3 1192 aaKnown RBP22.51■■□□□ 1.19
TRAPPC4-208ENST00000527680 MYO1AQ9UBC5 1043 aa22.51■■□□□ 1.19
TRAPPC4-208ENST00000527680 CNOT8Q9UFF9 292 aaKnown RBP22.51■■□□□ 1.19
TRAPPC4-208ENST00000527680 MOSPD1Q9UJG1 213 aa22.51■■□□□ 1.19
TRAPPC4-208ENST00000527680 PCDHGA8Q9Y5G5 932 aa22.51■■□□□ 1.19
TRAPPC4-208ENST00000527680 CCDC187A0A096LP49 1063 aa22.5■■□□□ 1.19
TRAPPC4-208ENST00000527680 A0A1W2PNU3 283 aaPredicted RBP22.5■■□□□ 1.19
TRAPPC4-208ENST00000527680 SMTNL1A8MU46 457 aa22.5■■□□□ 1.19
TRAPPC4-208ENST00000527680 RECQL5O94762 991 aaPredicted RBP22.5■■□□□ 1.19
TRAPPC4-208ENST00000527680 MBD3O95983 291 aa22.5■■□□□ 1.19
TRAPPC4-208ENST00000527680 ELFN1P0C7U0 828 aa22.5■■□□□ 1.19
TRAPPC4-208ENST00000527680 IL10RBQ08334 325 aa22.5■■□□□ 1.19
TRAPPC4-208ENST00000527680 RFTN1Q14699 578 aaPredicted RBP22.5■■□□□ 1.19
TRAPPC4-208ENST00000527680 AGERQ15109 404 aa22.5■■□□□ 1.19
TRAPPC4-208ENST00000527680 ANO6Q4KMQ2 910 aa22.5■■□□□ 1.19
TRAPPC4-208ENST00000527680 IGF2-ASQ6U949 168 aa22.5■■□□□ 1.19
TRAPPC4-208ENST00000527680 ARHGAP36Q6ZRI8 547 aa22.5■■□□□ 1.19
TRAPPC4-208ENST00000527680 TAF8Q7Z7C8 310 aa22.5■■□□□ 1.19
TRAPPC4-208ENST00000527680 PLA2G15Q8NCC3 412 aa22.5■■□□□ 1.19
TRAPPC4-208ENST00000527680 CCDC74AQ96AQ1 378 aa22.5■■□□□ 1.19
TRAPPC4-208ENST00000527680 GFM1Q96RP9 751 aaKnown RBP22.5■■□□□ 1.19
TRAPPC4-208ENST00000527680 SYT11Q9BT88 431 aa22.5■■□□□ 1.19
TRAPPC4-208ENST00000527680 TRIM7Q9C029 511 aa22.5■■□□□ 1.19
TRAPPC4-208ENST00000527680 ANKRD36A6QL64 1941 aa22.5■■□□□ 1.19
TRAPPC4-208ENST00000527680 SMG1Q96Q15 3661 aaKnown RBP22.5■■□□□ 1.19
TRAPPC4-208ENST00000527680 CFAP69A5D8W1 941 aa22.49■■□□□ 1.19
TRAPPC4-208ENST00000527680 GZMAP12544 262 aa22.49■■□□□ 1.19
TRAPPC4-208ENST00000527680 RENBPP51606 427 aa22.49■■□□□ 1.19
TRAPPC4-208ENST00000527680 CCL7P80098 99 aa22.49■■□□□ 1.19
TRAPPC4-208ENST00000527680 KLHL30Q0D2K2 578 aa22.49■■□□□ 1.19
TRAPPC4-208ENST00000527680 ACOX1Q15067 660 aa22.49■■□□□ 1.19
TRAPPC4-208ENST00000527680 LIPIQ6XZB0 460 aa22.49■■□□□ 1.19
TRAPPC4-208ENST00000527680 NYAP1Q6ZVC0 841 aa22.49■■□□□ 1.19
TRAPPC4-208ENST00000527680 ZNF571Q7Z3V5 609 aaPredicted RBP22.49■■□□□ 1.19
TRAPPC4-208ENST00000527680 ARHGAP12Q8IWW6 846 aa22.49■■□□□ 1.19
TRAPPC4-208ENST00000527680 FAM46DQ8NEK8 389 aa22.49■■□□□ 1.19
TRAPPC4-208ENST00000527680 OR6C4Q8NGE1 309 aa22.49■■□□□ 1.19
TRAPPC4-208ENST00000527680 ZNF653Q96CK0 615 aa22.49■■□□□ 1.19
TRAPPC4-208ENST00000527680 ZWILCHQ9H900 591 aa22.49■■□□□ 1.19
TRAPPC4-208ENST00000527680 EPB41L5Q9HCM4 733 aa22.49■■□□□ 1.19
TRAPPC4-208ENST00000527680 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.49■■□□□ 1.19
TRAPPC4-208ENST00000527680 CWC15Q9P013 229 aaKnown RBP22.49■■□□□ 1.19
TRAPPC4-208ENST00000527680 PMS2P1A4D2B8 440 aa22.48■■□□□ 1.19
TRAPPC4-208ENST00000527680 KELP23276 732 aa22.48■■□□□ 1.19
TRAPPC4-208ENST00000527680 ZNF135P52742 658 aaPredicted RBP22.48■■□□□ 1.19
TRAPPC4-208ENST00000527680 RHDQ02161 417 aa22.48■■□□□ 1.19
TRAPPC4-208ENST00000527680 LBRQ14739 615 aaKnown RBP22.48■■□□□ 1.19
TRAPPC4-208ENST00000527680 AFMIDQ63HM1 303 aa22.48■■□□□ 1.19
TRAPPC4-208ENST00000527680 PSTKQ8IV42 348 aaKnown RBP22.48■■□□□ 1.19
TRAPPC4-208ENST00000527680 LZTR1Q8N653 840 aa22.48■■□□□ 1.19
TRAPPC4-208ENST00000527680 NPWQ8N729 165 aa22.48■■□□□ 1.19
TRAPPC4-208ENST00000527680 Q8N9G6 341 aaPredicted RBP22.48■■□□□ 1.19
TRAPPC4-208ENST00000527680 OR56A4Q8NGH8 313 aa22.48■■□□□ 1.19
TRAPPC4-208ENST00000527680 FNIP1Q8TF40 1166 aa22.48■■□□□ 1.19
TRAPPC4-208ENST00000527680 PRR11Q96HE9 360 aaPredicted RBP22.48■■□□□ 1.19
TRAPPC4-208ENST00000527680 STRADBQ9C0K7 418 aa22.48■■□□□ 1.19
TRAPPC4-208ENST00000527680 MRPL47Q9HD33 250 aaKnown RBP22.48■■□□□ 1.19
TRAPPC4-208ENST00000527680 AIPL1Q9NZN9 384 aa22.48■■□□□ 1.19
TRAPPC4-208ENST00000527680 SEPT3Q9UH03 358 aa22.48■■□□□ 1.19
TRAPPC4-208ENST00000527680 RABGEF1Q9UJ41 708 aa22.48■■□□□ 1.19
TRAPPC4-208ENST00000527680 SCINQ9Y6U3 715 aa22.48■■□□□ 1.19
TRAPPC4-208ENST00000527680 UNC13CQ8NB66 2214 aa22.47■■□□□ 1.19
TRAPPC4-208ENST00000527680 TMEM202A6NGA9 273 aa22.47■■□□□ 1.19
TRAPPC4-208ENST00000527680 TMX2-CTNND1H3BSU7 103 aa22.47■■□□□ 1.19
TRAPPC4-208ENST00000527680 ERVH48-1M5A8F1 160 aa22.47■■□□□ 1.19
TRAPPC4-208ENST00000527680 NTN3O00634 580 aaPredicted RBP22.47■■□□□ 1.19
TRAPPC4-208ENST00000527680 RPLP0P05388 317 aaKnown RBP22.47■■□□□ 1.19
TRAPPC4-208ENST00000527680 ARL4AP40617 200 aa22.47■■□□□ 1.19
TRAPPC4-208ENST00000527680 HCAR3P49019 387 aa22.47■■□□□ 1.19
TRAPPC4-208ENST00000527680 VAC14Q08AM6 782 aa22.47■■□□□ 1.19
TRAPPC4-208ENST00000527680 FBXO39Q8N4B4 442 aa22.47■■□□□ 1.19
TRAPPC4-208ENST00000527680 PDCD6IPQ8WUM4 868 aaKnown RBP22.47■■□□□ 1.19
TRAPPC4-208ENST00000527680 OR1E3Q8WZA6 343 aa22.47■■□□□ 1.19
TRAPPC4-208ENST00000527680 FUBP1Q96AE4 644 aaKnown RBP22.47■■□□□ 1.19
TRAPPC4-208ENST00000527680 ECHDC3Q96DC8 303 aa22.47■■□□□ 1.19
TRAPPC4-208ENST00000527680 PDXPQ96GD0 296 aa22.47■■□□□ 1.19
TRAPPC4-208ENST00000527680 RBM15Q96T37 977 aaKnown RBP eCLIP22.47■■□□□ 1.19
TRAPPC4-208ENST00000527680 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.47■■□□□ 1.19
TRAPPC4-208ENST00000527680 FOXP3Q9BZS1 431 aa22.47■■□□□ 1.19
TRAPPC4-208ENST00000527680 MRPL40Q9NQ50 206 aaKnown RBP22.47■■□□□ 1.19
TRAPPC4-208ENST00000527680 DGKBQ9Y6T7 804 aa22.47■■□□□ 1.19
TRAPPC4-208ENST00000527680 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.46■■□□□ 1.19
TRAPPC4-208ENST00000527680 TTC24A2A3L6 582 aaPredicted RBP22.46■■□□□ 1.19
TRAPPC4-208ENST00000527680 H3BRJ5 948 aa22.46■■□□□ 1.19
TRAPPC4-208ENST00000527680 LRCH4O75427 683 aa22.46■■□□□ 1.19
TRAPPC4-208ENST00000527680 C1QL1O75973 258 aa22.46■■□□□ 1.19
TRAPPC4-208ENST00000527680 SKILP12757 684 aa22.46■■□□□ 1.19
TRAPPC4-208ENST00000527680 AP1S1P61966 158 aa22.46■■□□□ 1.19
TRAPPC4-208ENST00000527680 CFHR1Q03591 330 aa22.46■■□□□ 1.19
TRAPPC4-208ENST00000527680 SLC10A7Q0GE19 358 aa22.46■■□□□ 1.19
TRAPPC4-208ENST00000527680 RALGDSQ12967 914 aa22.46■■□□□ 1.19
TRAPPC4-208ENST00000527680 ZNF235Q14590 738 aa22.46■■□□□ 1.19
TRAPPC4-208ENST00000527680 TMCO4Q5TGY1 634 aa22.46■■□□□ 1.19
TRAPPC4-208ENST00000527680 DENND2CQ68D51 928 aa22.46■■□□□ 1.19
TRAPPC4-208ENST00000527680 DPPA4Q7L190 304 aa22.46■■□□□ 1.19
TRAPPC4-208ENST00000527680 RAB11FIP2Q7L804 512 aa22.46■■□□□ 1.19
TRAPPC4-208ENST00000527680 ZNF605Q86T29 641 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms