RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 HOXB6P17509 224 aaKnown RBP4.08□□□□□ -1.76
CD44-219ENST00000525685 CDC25AP30304 524 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 AVPR1AP37288 418 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 GPR12P47775 334 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 ARSFP54793 590 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 YWHAZP63104 245 aaKnown RBP4.08□□□□□ -1.76
CD44-219ENST00000525685 NEXNQ0ZGT2 675 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 EIF4A2Q14240 407 aaKnown RBP4.08□□□□□ -1.76
CD44-219ENST00000525685 ME3Q16798 604 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 WASHC2DQ5SRD0 308 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 UBAP2Q5T6F2 1119 aaKnown RBP4.08□□□□□ -1.76
CD44-219ENST00000525685 INTS11Q5TA45 600 aaKnown RBP4.08□□□□□ -1.76
CD44-219ENST00000525685 NCAPH2Q6IBW4 605 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 NHSQ6T4R5 1651 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 SLC16A12Q6ZSM3 486 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 SERPINA11Q86U17 422 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 TMC8Q8IU68 726 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 ZDHHC17Q8IUH5 632 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 ARMC8Q8IUR7 673 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 TEX19Q8NA77 164 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 CEP76Q8TAP6 659 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 DOT1LQ8TEK3 1739 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 TBC1D22AQ8WUA7 517 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 HDAC7Q8WUI4 952 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 ZUFSPQ96AP4 578 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 PPM1MQ96MI6 270 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 GFM1Q96RP9 751 aaKnown RBP4.08□□□□□ -1.76
CD44-219ENST00000525685 LHPPQ9H008 270 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 LMAN2LQ9H0V9 348 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 ISCUQ9H1K1 167 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 TTYH1Q9H313 450 aaPredicted RBP4.08□□□□□ -1.76
CD44-219ENST00000525685 ZHX3Q9H4I2 956 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 PREBQ9HCU5 417 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 BEX4Q9NWD9 120 aaPredicted RBP4.08□□□□□ -1.76
CD44-219ENST00000525685 PPP1R14DQ9NXH3 145 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 PCDHA12Q9UN75 941 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 CAMK2AQ9UQM7 478 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 TOGARAM1Q9Y4F4 1720 aa4.08□□□□□ -1.76
CD44-219ENST00000525685 SBF2Q86WG5 1849 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 IGSF1Q8N6C5 1336 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 GOLGA6L10A0A0M3HER8 536 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 A0A1B0GVC2 190 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 TTC36A6NLP5 189 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 TEX22C9J3V5 150 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 HSPB6O14558 160 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 CYP1A2P05177 515 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 TFPIP10646 304 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 ENO3P13929 434 aaPredicted RBP4.07□□□□□ -1.76
CD44-219ENST00000525685 FMO4P31512 558 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 LIFRP42702 1097 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 CTCFP49711 727 aaPredicted RBP4.07□□□□□ -1.76
CD44-219ENST00000525685 CDH12P55289 794 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 HDAC4P56524 1084 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 EFNB1P98172 346 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 FOXD4Q12950 439 aaPredicted RBP4.07□□□□□ -1.76
CD44-219ENST00000525685 DDX10Q13206 875 aaKnown RBP4.07□□□□□ -1.76
CD44-219ENST00000525685 BAK1Q16611 211 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 SLC9C2Q5TAH2 1124 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 NUGGCQ68CJ6 796 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 PARM1Q6UWI2 310 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 Q6ZTK2 550 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 MOB3CQ70IA8 216 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 TADA2BQ86TJ2 420 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 GPAT4Q86UL3 456 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 ZDHHC23Q8IYP9 409 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 TSPYL6Q8N831 410 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 ZBTB10Q96DT7 871 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 ELP4Q96EB1 424 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 ZC3HAV1LQ96H79 300 aaKnown RBP4.07□□□□□ -1.76
CD44-219ENST00000525685 PHF7Q9BWX1 381 aaPredicted RBP4.07□□□□□ -1.76
CD44-219ENST00000525685 POLDIP3Q9BY77 421 aaKnown RBP4.07□□□□□ -1.76
CD44-219ENST00000525685 NUF2Q9BZD4 464 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 UNC45AQ9H3U1 944 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 NCKIPSDQ9NZQ3 722 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 HCN3Q9P1Z3 774 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 HDAC6Q9UBN7 1215 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 SEL1LQ9UBV2 794 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 PGAP2Q9UHJ9 254 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 CYP46A1Q9Y6A2 500 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 RGPD3A6NKT7 1758 aaPredicted RBP4.07□□□□□ -1.76
CD44-219ENST00000525685 RGPD4Q7Z3J3 1758 aa4.07□□□□□ -1.76
CD44-219ENST00000525685 RREB1Q92766 1687 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 BCL9O00512 1426 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 KDRP35968 1356 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 PLEKHG2Q9H7P9 1386 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 RPS10-NUDT3A0A1W2PQS6 291 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 GAGE12JA6NER3 117 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 GAGE10A6NGK3 116 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 CD8B2A6NJW9 211 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 C17orf100A8MU93 164 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 J3KRW8 73 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 MDM4O15151 490 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 ATP2C2O75185 946 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 MTA2O94776 668 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 OAZ2O95190 189 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 TOMM40O96008 361 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 IFNA2P01563 188 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 KLKB1P03952 638 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 URODP06132 367 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 PSG1P11464 419 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms