RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 ADGRF1Q5T601 910 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 CLYBLQ8N0X4 340 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 ZCCHC9Q8N567 271 aaKnown RBP17.12■□□□□ 0.33
BEST1-203ENST00000524877 STARD8Q92502 1023 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 PHF21BQ96EK2 531 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 TRIM39Q9HCM9 518 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 FBXO6Q9NRD1 293 aaPredicted RBP17.12■□□□□ 0.33
BEST1-203ENST00000524877 SPATA6Q9NWH7 488 aaPredicted RBP17.12■□□□□ 0.33
BEST1-203ENST00000524877 IFNA16P05015 189 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 ATP6V1E1P36543 226 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 RFTN1Q14699 578 aaPredicted RBP17.12■□□□□ 0.33
BEST1-203ENST00000524877 ATAD3BQ5T9A4 648 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 ZNF280BQ86YH2 543 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 ECSITQ9BQ95 431 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 AURKCQ9UQB9 309 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 A0A096LPK6 155 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 CD3EAPO15446 510 aaKnown RBP17.12■□□□□ 0.33
BEST1-203ENST00000524877 INSIG1O15503 277 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 ZNF623O75123 536 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 HPCAL1P37235 193 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 MDH1P40925 334 aaKnown RBP17.12■□□□□ 0.33
BEST1-203ENST00000524877 DLG2Q15700 870 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 TFAP2BQ92481 460 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 KLHL32Q96NJ5 620 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 ANKRD27Q96NW4 1050 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 ZIM3Q96PE6 472 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 HAPLN3Q96S86 360 aa17.12■□□□□ 0.33
BEST1-203ENST00000524877 RHOP08100 348 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 GPR15P49685 360 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 SEL1L3Q68CR1 1132 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 ZNF776Q68DI1 518 aaPredicted RBP17.11■□□□□ 0.33
BEST1-203ENST00000524877 CCDC103Q8IW40 242 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 SH2D3CQ8N5H7 860 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 CCDC185Q8N715 623 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 STAG3L4Q8TBR4 150 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 P2RY11Q96G91 374 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 CCSER2Q9H7U1 834 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 DDX60Q8IY21 1712 aaKnown RBP17.11■□□□□ 0.33
BEST1-203ENST00000524877 SCN7AQ01118 1682 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 YJEFN3A6XGL0 299 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 LEFTY2O00292 366 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 CYTH1Q15438 398 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 POTEHQ6S545 545 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 FBXO25Q8TCJ0 367 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 CACNA2D2Q9NY47 1150 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 EURLQ9NYK6 297 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 TM9SF1O15321 606 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 HS6ST1O60243 411 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 RPL21P46778 160 aaKnown RBP17.11■□□□□ 0.33
BEST1-203ENST00000524877 ADARP55265 1226 aaKnown RBP17.11■□□□□ 0.33
BEST1-203ENST00000524877 HEATR4Q86WZ0 1026 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 USP7Q93009 1102 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 QKIQ96PU8 341 aaKnown RBP eCLIP17.11■□□□□ 0.33
BEST1-203ENST00000524877 SNX8Q9Y5X2 465 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 WNT6Q9Y6F9 365 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 MYO1GB0I1T2 1018 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 NDST3O95803 873 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 MAT2AP31153 395 aaKnown RBP17.11■□□□□ 0.33
BEST1-203ENST00000524877 ESRP1Q6NXG1 681 aaKnown RBP17.11■□□□□ 0.33
BEST1-203ENST00000524877 CAMKK1Q8N5S9 505 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 NCDNQ9UBB6 729 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 FBXO9Q9UK97 447 aaPredicted RBP17.11■□□□□ 0.33
BEST1-203ENST00000524877 LTA4HP09960 611 aaKnown RBP17.11■□□□□ 0.33
BEST1-203ENST00000524877 CENPAP49450 140 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 TEX44Q53QW1 395 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 CYP4X1Q8N118 509 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 FAM83DQ9H4H8 585 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 IL1RL2Q9HB29 575 aa17.11■□□□□ 0.33
BEST1-203ENST00000524877 SLC31A1O15431 190 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 RGS14O43566 566 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 SGTAO43765 313 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 IFNA14P01570 189 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 GTF2E2P29084 291 aaKnown RBP17.1■□□□□ 0.33
BEST1-203ENST00000524877 NTSP30990 170 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 NAA20P61599 178 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 PTPRNQ16849 979 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 CYP51A1Q16850 503 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 ZCWPW2Q504Y3 356 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 PLEKHA8Q96JA3 519 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 HGH1Q9BTY7 390 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 TRPC4Q9UBN4 977 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 PHTF1Q9UMS5 762 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 ADAMTS3O15072 1205 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 MFSD11O43934 449 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 VPS4BO75351 444 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 PPP1R37O75864 691 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 HOXB2P14652 356 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 PPP2R1BP30154 601 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 NYAP1Q6ZVC0 841 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 NRSN1Q8IZ57 195 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 PHC3Q8NDX5 983 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 OTUB2Q96DC9 234 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 THUMPD3Q9BV44 507 aaKnown RBP17.1■□□□□ 0.33
BEST1-203ENST00000524877 PPEF2O14830 753 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 PMM2O15305 246 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 RPP40O75818 363 aaKnown RBP17.1■□□□□ 0.33
BEST1-203ENST00000524877 LRIG2O94898 1065 aa17.1■□□□□ 0.33
BEST1-203ENST00000524877 CDH2P19022 906 aaPredicted RBP17.1■□□□□ 0.33
BEST1-203ENST00000524877 GUCA1AP43080 201 aaPredicted RBP17.1■□□□□ 0.33
BEST1-203ENST00000524877 N4BP2L1Q5TBK1 243 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms