RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 BEX3Q00994 111 aa8.35□□□□□ -1.07
CHD7-202ENST00000524602 SPATS1Q496A3 300 aa8.35□□□□□ -1.07
CHD7-202ENST00000524602 TMEM259Q4ZIN3 620 aa8.35□□□□□ -1.07
CHD7-202ENST00000524602 C1QTNF12Q5T7M4 302 aa8.35□□□□□ -1.07
CHD7-202ENST00000524602 CILP2Q8IUL8 1156 aa8.35□□□□□ -1.07
CHD7-202ENST00000524602 THEM5Q8N1Q8 247 aa8.35□□□□□ -1.07
CHD7-202ENST00000524602 UMODL1-AS1Q8N2C9 162 aa8.35□□□□□ -1.07
CHD7-202ENST00000524602 PEX13Q92968 403 aa8.35□□□□□ -1.07
CHD7-202ENST00000524602 EME1Q96AY2 570 aa8.35□□□□□ -1.07
CHD7-202ENST00000524602 CNBD2Q96M20 576 aa8.35□□□□□ -1.07
CHD7-202ENST00000524602 SERPINB11Q96P15 392 aa8.35□□□□□ -1.07
CHD7-202ENST00000524602 MFSD1Q9H3U5 465 aa8.35□□□□□ -1.07
CHD7-202ENST00000524602 RMI1Q9H9A7 625 aa8.35□□□□□ -1.07
CHD7-202ENST00000524602 MIOSQ9NXC5 875 aa8.35□□□□□ -1.07
CHD7-202ENST00000524602 TMEM181Q9P2C4 612 aa8.35□□□□□ -1.07
CHD7-202ENST00000524602 CD300AQ9UGN4 299 aa8.35□□□□□ -1.07
CHD7-202ENST00000524602 MEIS3P2A8K0S8 358 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 STX16-NPEPL1H3BU86 382 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 RNASEH2AO75792 299 aaKnown RBP8.34□□□□□ -1.07
CHD7-202ENST00000524602 SRP72O76094 671 aaKnown RBP8.34□□□□□ -1.07
CHD7-202ENST00000524602 PGM3O95394 542 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 CCDC166P0CW27 439 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 HNRNPLP14866 589 aaKnown RBP eCLIP8.34□□□□□ -1.071e-20■■■□□ 19.2
CHD7-202ENST00000524602 SCNN1GP51170 649 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 PURAQ00577 322 aaKnown RBP8.34□□□□□ -1.07
CHD7-202ENST00000524602 TSPY1Q01534 308 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 MGAT5BQ3V5L5 792 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 PRMT9Q6P2P2 845 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 C17orf99Q6UX52 265 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 GOLM1Q8NBJ4 401 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 OLFM1Q99784 485 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 RBM38Q9H0Z9 239 aaKnown RBP8.34□□□□□ -1.07
CHD7-202ENST00000524602 SUDS3Q9H7L9 328 aaPredicted RBP8.34□□□□□ -1.07
CHD7-202ENST00000524602 CROTQ9UKG9 612 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 VWA7Q9Y334 891 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 TRAF6Q9Y4K3 522 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 MYO16Q9Y6X6 1858 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 TDRD15B5MCY1 1934 aaKnown RBP8.34□□□□□ -1.07
CHD7-202ENST00000524602 MROH6A6NGR9 719 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 CASTOR2A6NHX0 329 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 E7ENX8 843 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 FBP2O00757 339 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 VILLO15195 856 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 GPR182O15218 404 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 NRP2O60462 931 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 ZNF623O75123 536 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 PGGT1BP53609 377 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 C1QTNF8P60827 252 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 STX1BP61266 288 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 FSCN1Q16658 493 aaKnown RBP8.34□□□□□ -1.07
CHD7-202ENST00000524602 AGKQ53H12 422 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 RBM20Q5T481 1227 aaKnown RBP8.34□□□□□ -1.07
CHD7-202ENST00000524602 HECTD2Q5U5R9 776 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 IL23RQ5VWK5 629 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 AGMOQ6ZNB7 445 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 SAPCD2Q86UD0 394 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 IFNL1Q8IU54 200 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 CHERPQ8IWX8 916 aaKnown RBP8.34□□□□□ -1.07
CHD7-202ENST00000524602 SPATA6LQ8N4H0 392 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 RNF148Q8N7C7 305 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 PCYOX1LQ8NBM8 494 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 HMGCLL1Q8TB92 370 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 CYP2S1Q96SQ9 504 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 SENP6Q9GZR1 1112 aaPredicted RBP8.34□□□□□ -1.07
CHD7-202ENST00000524602 GSTO2Q9H4Y5 243 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 POPDC3Q9HBV1 291 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 CACNG4Q9UBN1 327 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 CARNS1A5YM72 827 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 MRASO14807 208 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 TYMPP19971 482 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 CHRNA4P43681 627 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 SLC5A3P53794 718 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 MLLT6P55198 1093 aaPredicted RBP8.34□□□□□ -1.07
CHD7-202ENST00000524602 USP46P62068 366 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.34□□□□□ -1.07
CHD7-202ENST00000524602 NADK2Q4G0N4 442 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 C6orf52Q5T4I8 152 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 ACBD5Q5T8D3 534 aaPredicted RBP8.34□□□□□ -1.07
CHD7-202ENST00000524602 RBM44Q6ZP01 1051 aaKnown RBP8.34□□□□□ -1.07
CHD7-202ENST00000524602 LARP4Q71RC2 724 aaKnown RBP eCLIP8.34□□□□□ -1.07
CHD7-202ENST00000524602 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.34□□□□□ -1.07
CHD7-202ENST00000524602 SGF29Q96ES7 293 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 TRIM15Q9C019 465 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 UPF3AQ9H1J1 476 aaKnown RBP8.34□□□□□ -1.07
CHD7-202ENST00000524602 TLR6Q9Y2C9 796 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 MTF2Q9Y483 593 aaPredicted RBP8.34□□□□□ -1.07
CHD7-202ENST00000524602 HS3ST4Q9Y661 456 aa8.34□□□□□ -1.07
CHD7-202ENST00000524602 PLXNA3P51805 1871 aa8.33□□□□□ -1.08
CHD7-202ENST00000524602 TANC1Q9C0D5 1861 aa8.33□□□□□ -1.08
CHD7-202ENST00000524602 DYTNA2CJ06 578 aa8.33□□□□□ -1.08
CHD7-202ENST00000524602 TNFRSF10BO14763 440 aa8.33□□□□□ -1.08
CHD7-202ENST00000524602 PEX11BO96011 259 aa8.33□□□□□ -1.08
CHD7-202ENST00000524602 FGF4P08620 206 aa8.33□□□□□ -1.08
CHD7-202ENST00000524602 MSX2P35548 267 aaPredicted RBP8.33□□□□□ -1.08
CHD7-202ENST00000524602 NAA20P61599 178 aa8.33□□□□□ -1.08
CHD7-202ENST00000524602 HERVK_113P63132 956 aa8.33□□□□□ -1.08
CHD7-202ENST00000524602 CDKL1Q00532 357 aa8.33□□□□□ -1.08
CHD7-202ENST00000524602 ZNF678Q5SXM1 525 aa8.33□□□□□ -1.08
CHD7-202ENST00000524602 RGMBQ6NW40 437 aa8.33□□□□□ -1.08
CHD7-202ENST00000524602 MSANTD2Q6P1R3 559 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms