RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 GORASP1Q9BQQ3 440 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 RTKNQ9BST9 563 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 WRAP53Q9BUR4 548 aaKnown RBP12.02□□□□□ -0.49
CLN8-207ENST00000524258 TDRD1Q9BXT4 1180 aaKnown RBP12.02□□□□□ -0.49
CLN8-207ENST00000524258 SLC25A51Q9H1U9 297 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 GLOD4Q9HC38 313 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 MBNL1Q9NR56 388 aaKnown RBP12.02□□□□□ -0.49
CLN8-207ENST00000524258 B4GALT6Q9UBX8 382 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 PHTF1Q9UMS5 762 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 R3HDM2Q9Y2K5 976 aaKnown RBP12.02□□□□□ -0.49
CLN8-207ENST00000524258 COQ6Q9Y2Z9 468 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 A0A0U1RQS6 177 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 A0A1W2PQ67 120 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 NPIPB15A6NHN6 443 aaPredicted RBP12.01□□□□□ -0.49
CLN8-207ENST00000524258 C6P13671 934 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 RBL1P28749 1068 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 AKT2P31751 481 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 IGFALSP35858 605 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 CD86P42081 329 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 ID4P47928 161 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 RXRGP48443 463 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 PFN3P60673 137 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 POLR2LP62875 67 aaKnown RBP12.01□□□□□ -0.49
CLN8-207ENST00000524258 PUM1Q14671 1186 aaKnown RBP eCLIP12.01□□□□□ -0.49
CLN8-207ENST00000524258 TEAD4Q15561 434 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 SLC14A2Q15849 920 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 CNGA3Q16281 694 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 PRAMEF14Q5SWL7 426 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 ARMC12Q5T9G4 340 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 KDELC1Q6UW63 502 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 ZC3H18Q86VM9 953 aaKnown RBP12.01□□□□□ -0.49
CLN8-207ENST00000524258 KLHDC8BQ8IXV7 354 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 ZNF567Q8N184 647 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 PELI3Q8N2H9 469 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 UBL4BQ8N7F7 174 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 DENND6BQ8NEG7 585 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 SPATA22Q8NHS9 363 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 HTR3CQ8WXA8 447 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 AGAP3Q96P47 875 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 MYOCQ99972 504 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 FAM118BQ9BPY3 351 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 GTPBP2Q9BX10 602 aaKnown RBP12.01□□□□□ -0.49
CLN8-207ENST00000524258 GAREM1Q9H706 876 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 ERVMER34-1Q9H9K5 563 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 AASDHPPTQ9NRN7 309 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 CDV3Q9UKY7 258 aaKnown RBP12.01□□□□□ -0.49
CLN8-207ENST00000524258 PNMA8BQ9ULN7 279 aaPredicted RBP12.01□□□□□ -0.49
CLN8-207ENST00000524258 CHKBQ9Y259 395 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 ANKRD36A6QL64 1941 aa12.01□□□□□ -0.49
CLN8-207ENST00000524258 ARID1BQ8NFD5 2236 aaPredicted RBP12.01□□□□□ -0.49
CLN8-207ENST00000524258 LRRK1Q38SD2 2015 aa12□□□□□ -0.49
CLN8-207ENST00000524258 A0A0J9YYE9 177 aa12□□□□□ -0.49
CLN8-207ENST00000524258 A0A1B0GTQ1 180 aa12□□□□□ -0.49
CLN8-207ENST00000524258 DCDC2BA2VCK2 349 aa12□□□□□ -0.49
CLN8-207ENST00000524258 NEMP1O14524 444 aa12□□□□□ -0.49
CLN8-207ENST00000524258 CBFA2T3O75081 653 aa12□□□□□ -0.49
CLN8-207ENST00000524258 TM7SF2O76062 418 aa12□□□□□ -0.49
CLN8-207ENST00000524258 HEXIM1O94992 359 aaKnown RBP12□□□□□ -0.49
CLN8-207ENST00000524258 CPP00450 1065 aa12□□□□□ -0.49
CLN8-207ENST00000524258 TRBC1P01850 177 aa12□□□□□ -0.49
CLN8-207ENST00000524258 SDHBP21912 280 aa12□□□□□ -0.49
CLN8-207ENST00000524258 HNF1BP35680 557 aa12□□□□□ -0.49
CLN8-207ENST00000524258 FAM193AP78312 1265 aa12□□□□□ -0.49
CLN8-207ENST00000524258 ITKQ08881 620 aa12□□□□□ -0.49
CLN8-207ENST00000524258 SLC14A1Q13336 389 aa12□□□□□ -0.49
CLN8-207ENST00000524258 GSE1Q14687 1217 aa12□□□□□ -0.49
CLN8-207ENST00000524258 STAT4Q14765 748 aa12□□□□□ -0.49
CLN8-207ENST00000524258 SIX1Q15475 284 aaPredicted RBP12□□□□□ -0.49
CLN8-207ENST00000524258 QPCTQ16769 361 aa12□□□□□ -0.49
CLN8-207ENST00000524258 ERAP2Q6P179 960 aa12□□□□□ -0.49
CLN8-207ENST00000524258 CRTC1Q6UUV9 634 aa12□□□□□ -0.49
CLN8-207ENST00000524258 IL27RAQ6UWB1 636 aa12□□□□□ -0.49
CLN8-207ENST00000524258 KYAT3Q6YP21 454 aaKnown RBP12□□□□□ -0.49
CLN8-207ENST00000524258 TECPR1Q7Z6L1 1165 aa12□□□□□ -0.49
CLN8-207ENST00000524258 TSPAN33Q86UF1 283 aa12□□□□□ -0.49
CLN8-207ENST00000524258 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12□□□□□ -0.49
CLN8-207ENST00000524258 SLC35B2Q8TB61 432 aa12□□□□□ -0.49
CLN8-207ENST00000524258 CXorf40AQ8TE69 158 aa12□□□□□ -0.49
CLN8-207ENST00000524258 OXNAD1Q96HP4 312 aaPredicted RBP12□□□□□ -0.49
CLN8-207ENST00000524258 LYSMD1Q96S90 227 aa12□□□□□ -0.49
CLN8-207ENST00000524258 RBM15Q96T37 977 aaKnown RBP eCLIP12□□□□□ -0.492e-6■■■■□ 21
CLN8-207ENST00000524258 SEPT10Q9P0V9 454 aa12□□□□□ -0.49
CLN8-207ENST00000524258 PCDHGB2Q9Y5G2 931 aa12□□□□□ -0.49
CLN8-207ENST00000524258 A8MX80 341 aa11.99□□□□□ -0.49
CLN8-207ENST00000524258 MTSS1O43312 755 aa11.99□□□□□ -0.49
CLN8-207ENST00000524258 PCDHGA12O60330 932 aa11.99□□□□□ -0.49
CLN8-207ENST00000524258 OPHN1O60890 802 aa11.99□□□□□ -0.49
CLN8-207ENST00000524258 RECQL5O94762 991 aaPredicted RBP11.99□□□□□ -0.49
CLN8-207ENST00000524258 TJP3O95049 919 aa11.99□□□□□ -0.49
CLN8-207ENST00000524258 MT-CYBP00156 380 aaPredicted RBP11.99□□□□□ -0.49
CLN8-207ENST00000524258 ALPIP09923 528 aa11.99□□□□□ -0.49
CLN8-207ENST00000524258 THEGLP0DJG4 465 aa11.99□□□□□ -0.49
CLN8-207ENST00000524258 RBP3P10745 1247 aa11.99□□□□□ -0.49
CLN8-207ENST00000524258 CTPS1P17812 591 aa11.99□□□□□ -0.49
CLN8-207ENST00000524258 NFKB1P19838 968 aa11.99□□□□□ -0.49
CLN8-207ENST00000524258 XPAP23025 273 aaPredicted RBP11.99□□□□□ -0.49
CLN8-207ENST00000524258 VIPR1P32241 457 aa11.99□□□□□ -0.49
CLN8-207ENST00000524258 EIF3EP60228 445 aaKnown RBP11.99□□□□□ -0.49
CLN8-207ENST00000524258 RPL26P61254 145 aaKnown RBP11.99□□□□□ -0.49
CLN8-207ENST00000524258 PTSQ03393 145 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms