RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 A0A087WUV0 522 aaPredicted RBP9.39□□□□□ -0.91
SDCBP-212ENST00000523483 HEATR9A2RTY3 570 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 FOXO6A8MYZ6 492 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 CLDN7O95471 211 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 GSRP00390 522 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 THOC5Q13769 683 aaKnown RBP9.39□□□□□ -0.91
SDCBP-212ENST00000523483 ARHGEF7Q14155 803 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 TMED2Q15363 201 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 MLF2Q15773 248 aaPredicted RBP9.39□□□□□ -0.91
SDCBP-212ENST00000523483 PUS10Q3MIT2 529 aaKnown RBP9.39□□□□□ -0.91
SDCBP-212ENST00000523483 TMEM31Q5JXX7 168 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 KIAA0907Q7Z7F0 614 aaPredicted RBP9.39□□□□□ -0.91
SDCBP-212ENST00000523483 RASSF3Q86WH2 238 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.39□□□□□ -0.91
SDCBP-212ENST00000523483 GSDMBQ8TAX9 411 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 PBXIP1Q96AQ6 731 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 ISG20Q96AZ6 181 aaKnown RBP9.39□□□□□ -0.91
SDCBP-212ENST00000523483 HCN2Q9UL51 889 aa9.39□□□□□ -0.91
SDCBP-212ENST00000523483 ARIH1Q9Y4X5 557 aaPredicted RBP9.39□□□□□ -0.91
SDCBP-212ENST00000523483 LOC285095A0A1B0GVY8 99 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 C2orf81A6NN90 581 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 GPR39O43194 453 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 RNASEH1O60930 286 aaKnown RBP9.38□□□□□ -0.91
SDCBP-212ENST00000523483 RNASEH2AO75792 299 aaKnown RBP9.38□□□□□ -0.91
SDCBP-212ENST00000523483 FAM155BO75949 473 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 NTSR1P30989 418 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 HNF1BP35680 557 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 ANKRD20A4Q4UJ75 823 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 C9orf64Q5T6V5 341 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 ZNF852Q6ZMS4 543 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 USP45Q70EL2 814 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 NDUFAF2Q8N183 169 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 IL17RCQ8NAC3 791 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 NAT14Q8WUY8 206 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 DNASE1L2Q92874 299 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 HDAC10Q969S8 669 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 FAM136AQ96C01 138 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 TBATAQ96M53 351 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 PRSS16Q9NQE7 514 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 IARS2Q9NSE4 1012 aaKnown RBP9.38□□□□□ -0.91
SDCBP-212ENST00000523483 TCAF1Q9Y4C2 921 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 CHD5Q8TDI0 1954 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 USP34Q70CQ2 3546 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 C16orf96A6NNT2 1141 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 E7ESA3 106 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 RASGRF2O14827 1237 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 EIF3HO15372 352 aaKnown RBP eCLIP9.38□□□□□ -0.91
SDCBP-212ENST00000523483 UGT1A9O60656 530 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 PRNPP04156 253 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 INHBAP08476 426 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 ADRA1DP25100 572 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 UGP2Q16851 508 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 ALG1LQ6GMV1 187 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 PKN3Q6P5Z2 889 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 HMGB4Q8WW32 186 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 AGAP2Q99490 1192 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 EPB41L4BQ9H329 900 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 FAM96AQ9H5X1 160 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 UGT1A7Q9HAW7 530 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 UGT1A10Q9HAW8 530 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 UGT1A8Q9HAW9 530 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 ZFYVE1Q9HBF4 777 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 PKP3Q9Y446 797 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 MTF2Q9Y483 593 aaPredicted RBP9.38□□□□□ -0.91
SDCBP-212ENST00000523483 NPIPB15A6NHN6 443 aaPredicted RBP9.38□□□□□ -0.91
SDCBP-212ENST00000523483 AP3B1O00203 1094 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 MID1O15344 667 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 PCDH8O95206 1070 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 CRTAMO95727 393 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 KRT15P19012 456 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 DRD1P21728 446 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 MSH2P43246 934 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 MAGEA3P43357 314 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 CTBP1Q13363 440 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 TMEM196Q5HYL7 178 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.38□□□□□ -0.91
SDCBP-212ENST00000523483 DSG4Q86SJ6 1040 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 KCNMB4Q86W47 210 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 TMPRSS6Q8IU80 811 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 MDGA1Q8NFP4 955 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 CDKL2Q92772 493 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 LRRC39Q96DD0 335 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 TRIB3Q96RU7 358 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 OMDQ99983 421 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 MKRN2Q9H000 416 aaKnown RBP9.38□□□□□ -0.91
SDCBP-212ENST00000523483 TMEM245Q9H330 911 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 MFSD1Q9H3U5 465 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 B4GALT6Q9UBX8 382 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 SUN2Q9UH99 717 aa9.38□□□□□ -0.91
SDCBP-212ENST00000523483 A0A0J9YYE9 177 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 A0A1W2PP55 124 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 CXorf49A8MYA2 514 aaPredicted RBP9.37□□□□□ -0.91
SDCBP-212ENST00000523483 LOC730098B7Z3J9 87 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 SOCS5O75159 536 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 TRBC1P01850 177 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 MYZAPP0CAP1 466 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 PAMP19021 973 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 KIR2DL1P43626 348 aaPredicted RBP9.37□□□□□ -0.91
SDCBP-212ENST00000523483 PXNP49023 591 aaPredicted RBP9.37□□□□□ -0.91
SDCBP-212ENST00000523483 ARSDP51689 593 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms