RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 PTPRCAPQ14761 206 aa18.55■□□□□ 0.56
TRAPPC9-210ENST00000521667 TSNAXIP1Q2TAA8 658 aa18.55■□□□□ 0.56
TRAPPC9-210ENST00000521667 HSF5Q4G112 596 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC9-210ENST00000521667 LRRC8EQ6NSJ5 796 aa18.55■□□□□ 0.56
TRAPPC9-210ENST00000521667 NCEH1Q6PIU2 408 aa18.55■□□□□ 0.56
TRAPPC9-210ENST00000521667 ZYG11AQ6WRX3 759 aa18.55■□□□□ 0.56
TRAPPC9-210ENST00000521667 FSTL5Q8N475 847 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC9-210ENST00000521667 LPCAT1Q8NF37 534 aa18.55■□□□□ 0.56
TRAPPC9-210ENST00000521667 GPR150Q8NGU9 434 aa18.55■□□□□ 0.56
TRAPPC9-210ENST00000521667 TSPAN17Q96FV3 270 aa18.55■□□□□ 0.56
TRAPPC9-210ENST00000521667 SORT1Q99523 831 aa18.55■□□□□ 0.56
TRAPPC9-210ENST00000521667 SLC46A2Q9BY10 475 aa18.55■□□□□ 0.56
TRAPPC9-210ENST00000521667 OXSMQ9NWU1 459 aa18.55■□□□□ 0.56
TRAPPC9-210ENST00000521667 DNMT3BQ9UBC3 853 aaKnown RBP18.55■□□□□ 0.56
TRAPPC9-210ENST00000521667 SLC4A7Q9Y6M7 1214 aa18.55■□□□□ 0.56
TRAPPC9-210ENST00000521667 CCDC162PA2VCL2 907 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 LEFTY2O00292 366 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 PDHA1P08559 390 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 SBK3P0C264 359 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 TARSP26639 723 aaKnown RBP18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 RHOAP61586 193 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 MPPE1Q53F39 396 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 MPP7Q5T2T1 576 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 MRNIPQ6NTE8 343 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 TBC1D1Q86TI0 1168 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 LDB1Q86U70 411 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 NXNL1Q96CM4 212 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 GPR78Q96P69 363 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 OLFM1Q99784 485 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 ADGRE3Q9BY15 652 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 SAR1AQ9NR31 198 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 NLE1Q9NVX2 485 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 TMEM114B3SHH9 223 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 CD3EAPO15446 510 aaKnown RBP18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 ARRB2P32121 409 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 CLCN4P51793 760 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 KPNA2P52292 529 aaKnown RBP18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 ZNF140P52738 457 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 DLG1Q12959 904 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 TAF1AQ15573 450 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 CTC1Q2NKJ3 1217 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 HECTD2Q5U5R9 776 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 ATG14Q6ZNE5 492 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 GLT6D1Q7Z4J2 308 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 PNPLA1Q8N8W4 532 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 PHOSPHO2Q8TCD6 241 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 POF1BQ8WVV4 589 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 C2orf49Q9BVC5 232 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 ARHGEF3Q9NR81 526 aa18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 FCF1Q9Y324 198 aaKnown RBP18.54■□□□□ 0.56
TRAPPC9-210ENST00000521667 TARM1B6A8C7 271 aa18.53■□□□□ 0.56
TRAPPC9-210ENST00000521667 T-ENOLP0DO92 83 aa18.53■□□□□ 0.56
TRAPPC9-210ENST00000521667 NQO1P15559 274 aaKnown RBP18.53■□□□□ 0.56
TRAPPC9-210ENST00000521667 PRKAA2P54646 552 aa18.53■□□□□ 0.56
TRAPPC9-210ENST00000521667 TRAF2Q12933 501 aa18.53■□□□□ 0.56
TRAPPC9-210ENST00000521667 RALGPS1Q5JS13 557 aa18.53■□□□□ 0.56
TRAPPC9-210ENST00000521667 NAPRTQ6XQN6 538 aa18.53■□□□□ 0.56
TRAPPC9-210ENST00000521667 APCDD1Q8J025 514 aa18.53■□□□□ 0.56
TRAPPC9-210ENST00000521667 MDGA1Q8NFP4 955 aa18.53■□□□□ 0.56
TRAPPC9-210ENST00000521667 OR4L1Q8NH43 312 aa18.53■□□□□ 0.56
TRAPPC9-210ENST00000521667 TTC8Q8TAM2 541 aa18.53■□□□□ 0.56
TRAPPC9-210ENST00000521667 SPPL3Q8TCT6 385 aa18.53■□□□□ 0.56
TRAPPC9-210ENST00000521667 HERVK_113Q902F9 699 aa18.53■□□□□ 0.56
TRAPPC9-210ENST00000521667 CDKN2AIPNLQ96HQ2 116 aa18.53■□□□□ 0.56
TRAPPC9-210ENST00000521667 CATSPERZQ9NTU4 200 aa18.53■□□□□ 0.56
TRAPPC9-210ENST00000521667 HCFC1R1Q9NWW0 138 aa18.53■□□□□ 0.56
TRAPPC9-210ENST00000521667 XPR1Q9UBH6 696 aa18.53■□□□□ 0.56
TRAPPC9-210ENST00000521667 HAO1Q9UJM8 370 aa18.53■□□□□ 0.56
TRAPPC9-210ENST00000521667 ARHGAP26Q9UNA1 814 aa18.53■□□□□ 0.56
TRAPPC9-210ENST00000521667 TRIM33Q9UPN9 1127 aa18.53■□□□□ 0.56
TRAPPC9-210ENST00000521667 VWA7Q9Y334 891 aa18.53■□□□□ 0.56
TRAPPC9-210ENST00000521667 C2orf81A6NN90 581 aa18.52■□□□□ 0.56
TRAPPC9-210ENST00000521667 CBX6O95503 412 aa18.52■□□□□ 0.56
TRAPPC9-210ENST00000521667 OGNP20774 298 aaKnown RBP18.52■□□□□ 0.56
TRAPPC9-210ENST00000521667 CCR2P41597 374 aa18.52■□□□□ 0.56
TRAPPC9-210ENST00000521667 KCNJ2P63252 427 aa18.52■□□□□ 0.56
TRAPPC9-210ENST00000521667 TTC31Q49AM3 519 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC9-210ENST00000521667 LIPMQ5VYY2 423 aa18.52■□□□□ 0.56
TRAPPC9-210ENST00000521667 RETSATQ6NUM9 610 aa18.52■□□□□ 0.56
TRAPPC9-210ENST00000521667 TPGS1Q6ZTW0 290 aa18.52■□□□□ 0.56
TRAPPC9-210ENST00000521667 ALYREFQ86V81 257 aaKnown RBP18.52■□□□□ 0.56
TRAPPC9-210ENST00000521667 SPATA6LQ8N4H0 392 aa18.52■□□□□ 0.56
TRAPPC9-210ENST00000521667 GATA5Q9BWX5 397 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC9-210ENST00000521667 SMG9Q9H0W8 520 aaKnown RBP18.52■□□□□ 0.56
TRAPPC9-210ENST00000521667 MRPL46Q9H2W6 279 aaKnown RBP18.52■□□□□ 0.56
TRAPPC9-210ENST00000521667 TLR9Q9NR96 1032 aa18.52■□□□□ 0.56
TRAPPC9-210ENST00000521667 ANKRD66B4E2M5 251 aa18.52■□□□□ 0.55
TRAPPC9-210ENST00000521667 FCHO1O14526 889 aa18.52■□□□□ 0.55
TRAPPC9-210ENST00000521667 MT-CO1P00395 513 aa18.52■□□□□ 0.55
TRAPPC9-210ENST00000521667 ATP5BP06576 529 aaKnown RBP18.52■□□□□ 0.55
TRAPPC9-210ENST00000521667 SPRED2Q7Z698 418 aa18.52■□□□□ 0.55
TRAPPC9-210ENST00000521667 SDCCAG8Q86SQ7 713 aaPredicted RBP18.52■□□□□ 0.55
TRAPPC9-210ENST00000521667 KIF2BQ8N4N8 673 aa18.52■□□□□ 0.55
TRAPPC9-210ENST00000521667 SHKBP1Q8TBC3 707 aa18.52■□□□□ 0.55
TRAPPC9-210ENST00000521667 PDCD6IPQ8WUM4 868 aaKnown RBP18.52■□□□□ 0.55
TRAPPC9-210ENST00000521667 HEXDCQ8WVB3 486 aa18.52■□□□□ 0.55
TRAPPC9-210ENST00000521667 SCG3Q8WXD2 468 aaKnown RBP18.52■□□□□ 0.55
TRAPPC9-210ENST00000521667 ACDQ96AP0 544 aa18.52■□□□□ 0.55
TRAPPC9-210ENST00000521667 LRMDAQ9H2I8 198 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms