RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 FGF22Q9HCT0 170 aa13.64□□□□□ -0.23
SPARC-203ENST00000521327 MRPL40Q9NQ50 206 aaKnown RBP13.64□□□□□ -0.23
SPARC-203ENST00000521327 GEMIN8Q9NWZ8 242 aaKnown RBP13.64□□□□□ -0.23
SPARC-203ENST00000521327 LHX3Q9UBR4 397 aa13.64□□□□□ -0.23
SPARC-203ENST00000521327 TSPAN11A1L157 253 aa13.63□□□□□ -0.23
SPARC-203ENST00000521327 B4DGG1 531 aa13.63□□□□□ -0.23
SPARC-203ENST00000521327 CACNB4O00305 520 aaPredicted RBP13.63□□□□□ -0.23
SPARC-203ENST00000521327 B4GAT1O43505 415 aa13.63□□□□□ -0.23
SPARC-203ENST00000521327 BUB1BO60566 1050 aaPredicted RBP13.63□□□□□ -0.23
SPARC-203ENST00000521327 UCHL3P15374 230 aa13.63□□□□□ -0.23
SPARC-203ENST00000521327 YBEYP58557 167 aaPredicted RBP13.63□□□□□ -0.23
SPARC-203ENST00000521327 TLE1Q04724 770 aa13.63□□□□□ -0.23
SPARC-203ENST00000521327 SERINC3Q13530 473 aa13.63□□□□□ -0.23
SPARC-203ENST00000521327 HLTFQ14527 1009 aaKnown RBP eCLIP13.63□□□□□ -0.23
SPARC-203ENST00000521327 C16orf72Q14CZ0 275 aa13.63□□□□□ -0.23
SPARC-203ENST00000521327 AGERQ15109 404 aa13.63□□□□□ -0.23
SPARC-203ENST00000521327 AMZ1Q400G9 498 aa13.63□□□□□ -0.23
SPARC-203ENST00000521327 MAP9Q49MG5 647 aa13.63□□□□□ -0.23
SPARC-203ENST00000521327 MIIPQ5JXC2 388 aa13.63□□□□□ -0.23
SPARC-203ENST00000521327 SLFN11Q7Z7L1 901 aa13.63□□□□□ -0.23
SPARC-203ENST00000521327 ZSWIM9Q86XI8 627 aa13.63□□□□□ -0.23
SPARC-203ENST00000521327 CAMK1DQ8IU85 385 aa13.63□□□□□ -0.23
SPARC-203ENST00000521327 CCL4L1Q8NHW4 92 aa13.63□□□□□ -0.23
SPARC-203ENST00000521327 SLC30A5Q8TAD4 765 aa13.63□□□□□ -0.23
SPARC-203ENST00000521327 NTAN1Q96AB6 310 aa13.63□□□□□ -0.23
SPARC-203ENST00000521327 C11orf70Q9BRQ4 267 aa13.63□□□□□ -0.23
SPARC-203ENST00000521327 TUBGCP2Q9BSJ2 902 aa13.63□□□□□ -0.23
SPARC-203ENST00000521327 STK33Q9BYT3 514 aa13.63□□□□□ -0.23
SPARC-203ENST00000521327 AKAP7Q9P0M2 348 aaPredicted RBP13.63□□□□□ -0.23
SPARC-203ENST00000521327 MOSPD1Q9UJG1 213 aa13.63□□□□□ -0.23
SPARC-203ENST00000521327 F8VZ95 297 aa13.62□□□□□ -0.23
SPARC-203ENST00000521327 NUDT21O43809 227 aaKnown RBP13.62□□□□□ -0.23
SPARC-203ENST00000521327 CREB3O43889 395 aa13.62□□□□□ -0.23
SPARC-203ENST00000521327 RECQL5O94762 991 aaPredicted RBP13.62□□□□□ -0.23
SPARC-203ENST00000521327 CYP1A1P04798 512 aaPredicted RBP13.62□□□□□ -0.23
SPARC-203ENST00000521327 KRT3P12035 628 aa13.62□□□□□ -0.23
SPARC-203ENST00000521327 CCL4P13236 92 aa13.62□□□□□ -0.23
SPARC-203ENST00000521327 CD82P27701 267 aa13.62□□□□□ -0.23
SPARC-203ENST00000521327 ALDH4A1P30038 563 aa13.62□□□□□ -0.23
SPARC-203ENST00000521327 RFC1P35251 1148 aaPredicted RBP13.62□□□□□ -0.23
SPARC-203ENST00000521327 MMP12P39900 470 aa13.62□□□□□ -0.23
SPARC-203ENST00000521327 OR1D5P58170 312 aa13.62□□□□□ -0.23
SPARC-203ENST00000521327 B4GALNT1Q00973 533 aa13.62□□□□□ -0.23
SPARC-203ENST00000521327 GRM3Q14832 879 aa13.62□□□□□ -0.23
SPARC-203ENST00000521327 PARP15Q460N3 678 aa13.62□□□□□ -0.23
SPARC-203ENST00000521327 SPECC1LQ69YQ0 1117 aa13.62□□□□□ -0.23
SPARC-203ENST00000521327 BRAT1Q6PJG6 821 aa13.62□□□□□ -0.23
SPARC-203ENST00000521327 PIM3Q86V86 326 aa13.62□□□□□ -0.23
SPARC-203ENST00000521327 DNAAF5Q86Y56 855 aa13.62□□□□□ -0.23
SPARC-203ENST00000521327 PTRH1Q86Y79 214 aaKnown RBP13.62□□□□□ -0.23
SPARC-203ENST00000521327 FAM114A1Q8IWE2 563 aa13.62□□□□□ -0.23
SPARC-203ENST00000521327 MLKLQ8NB16 471 aa13.62□□□□□ -0.23
SPARC-203ENST00000521327 ZNF641Q96N77 438 aaPredicted RBP13.62□□□□□ -0.23
SPARC-203ENST00000521327 FUCA2Q9BTY2 467 aa13.62□□□□□ -0.23
SPARC-203ENST00000521327 CYP4F12Q9HCS2 524 aa13.62□□□□□ -0.23
SPARC-203ENST00000521327 UBA2Q9UBT2 640 aaPredicted RBP13.62□□□□□ -0.23
SPARC-203ENST00000521327 NOCTQ9UK39 431 aaKnown RBP13.62□□□□□ -0.23
SPARC-203ENST00000521327 ATP8A1Q9Y2Q0 1164 aa13.62□□□□□ -0.23
SPARC-203ENST00000521327 BSNQ9UPA5 3926 aa13.62□□□□□ -0.23
SPARC-203ENST00000521327 STMND1H3BQB6 276 aa13.61□□□□□ -0.23
SPARC-203ENST00000521327 J3KR12 359 aa13.61□□□□□ -0.23
SPARC-203ENST00000521327 TNFRSF10CO14798 259 aa13.61□□□□□ -0.23
SPARC-203ENST00000521327 GFPT2O94808 682 aa13.61□□□□□ -0.23
SPARC-203ENST00000521327 CPNE6O95741 557 aa13.61□□□□□ -0.23
SPARC-203ENST00000521327 CHRNB2P17787 502 aa13.61□□□□□ -0.23
SPARC-203ENST00000521327 KELP23276 732 aa13.61□□□□□ -0.23
SPARC-203ENST00000521327 KIAA1024LP59773 190 aa13.61□□□□□ -0.23
SPARC-203ENST00000521327 CDR2Q01850 454 aa13.61□□□□□ -0.23
SPARC-203ENST00000521327 EFHC2Q5JST6 749 aa13.61□□□□□ -0.23
SPARC-203ENST00000521327 SCYL2Q6P3W7 929 aa13.61□□□□□ -0.23
SPARC-203ENST00000521327 ZNF677Q86XU0 584 aa13.61□□□□□ -0.23
SPARC-203ENST00000521327 RCBTB1Q8NDN9 531 aa13.61□□□□□ -0.23
SPARC-203ENST00000521327 LGR4Q9BXB1 951 aa13.61□□□□□ -0.23
SPARC-203ENST00000521327 SLC12A9Q9BXP2 914 aa13.61□□□□□ -0.23
SPARC-203ENST00000521327 SUDS3Q9H7L9 328 aaPredicted RBP13.61□□□□□ -0.23
SPARC-203ENST00000521327 SPATS2LQ9NUQ6 558 aaKnown RBP13.61□□□□□ -0.23
SPARC-203ENST00000521327 SEPT3Q9UH03 358 aa13.61□□□□□ -0.23
SPARC-203ENST00000521327 FLNCQ14315 2725 aa13.6□□□□□ -0.23
SPARC-203ENST00000521327 CFAP69A5D8W1 941 aa13.6□□□□□ -0.23
SPARC-203ENST00000521327 RHPN2P1A8MT19 583 aa13.6□□□□□ -0.23
SPARC-203ENST00000521327 A8MX80 341 aa13.6□□□□□ -0.23
SPARC-203ENST00000521327 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.6□□□□□ -0.23
SPARC-203ENST00000521327 TEX33O43247 280 aa13.6□□□□□ -0.23
SPARC-203ENST00000521327 HOXC4P09017 264 aaPredicted RBP13.6□□□□□ -0.23
SPARC-203ENST00000521327 GPD1P21695 349 aa13.6□□□□□ -0.23
SPARC-203ENST00000521327 TRIM23P36406 574 aa13.6□□□□□ -0.23
SPARC-203ENST00000521327 MAZP56270 477 aaKnown RBP13.6□□□□□ -0.23
SPARC-203ENST00000521327 FMO1Q01740 532 aa13.6□□□□□ -0.23
SPARC-203ENST00000521327 RALGDSQ12967 914 aa13.6□□□□□ -0.23
SPARC-203ENST00000521327 BORAQ6PGQ7 559 aa13.6□□□□□ -0.23
SPARC-203ENST00000521327 WDR59Q6PJI9 974 aa13.6□□□□□ -0.23
SPARC-203ENST00000521327 LIPIQ6XZB0 460 aa13.6□□□□□ -0.23
SPARC-203ENST00000521327 SRLQ86TD4 932 aa13.6□□□□□ -0.23
SPARC-203ENST00000521327 UMODL1-AS1Q8N2C9 162 aa13.6□□□□□ -0.23
SPARC-203ENST00000521327 PAF1Q8N7H5 531 aa13.6□□□□□ -0.23
SPARC-203ENST00000521327 KIAA1524Q8TCG1 905 aa13.6□□□□□ -0.23
SPARC-203ENST00000521327 NKD1Q969G9 470 aa13.6□□□□□ -0.23
SPARC-203ENST00000521327 PMEPA1Q969W9 287 aa13.6□□□□□ -0.23
SPARC-203ENST00000521327 TAAR9Q96RI9 348 aa13.6□□□□□ -0.23
SPARC-203ENST00000521327 TUBGCP5Q96RT8 1024 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms