RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 NDUFS2O75306 463 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 IGSF6O95976 241 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 GOLGA6DP0CG33 693 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 CHRNB1P11230 501 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 HNRNPLP14866 589 aaKnown RBP eCLIP6.04□□□□□ -1.44
FAM49B-218ENST00000520887 COMTP21964 271 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 HLA-FP30511 346 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 CNR2P34972 360 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 HSPA9P38646 679 aaKnown RBP6.04□□□□□ -1.44
FAM49B-218ENST00000520887 DPP6P42658 865 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 HCAR3P49019 387 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 DNA2P51530 1060 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 ATXN1P54253 815 aaKnown RBP6.04□□□□□ -1.44
FAM49B-218ENST00000520887 SNRPD1P62314 119 aaKnown RBP6.04□□□□□ -1.44
FAM49B-218ENST00000520887 EIF4EBP2Q13542 120 aaPredicted RBP6.04□□□□□ -1.44
FAM49B-218ENST00000520887 ZNF234Q14588 700 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 RFTN1Q14699 578 aaPredicted RBP6.04□□□□□ -1.44
FAM49B-218ENST00000520887 TCEAL1Q15170 157 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 ELF2Q15723 593 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 USP39Q53GS9 565 aaKnown RBP6.04□□□□□ -1.44
FAM49B-218ENST00000520887 TFDP3Q5H9I0 405 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 KCNT1Q5JUK3 1230 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 CWF19L1Q69YN2 538 aaKnown RBP6.04□□□□□ -1.44
FAM49B-218ENST00000520887 FSTL4Q6MZW2 842 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 KIAA1324Q6UXG2 1013 aaKnown RBP6.04□□□□□ -1.44
FAM49B-218ENST00000520887 RAD9BQ6WBX8 426 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 UNC5AQ6ZN44 842 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 CEP68Q76N32 757 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 BNIPLQ7Z465 357 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 KBTBD6Q86V97 674 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 CIR1Q86X95 450 aaPredicted RBP6.04□□□□□ -1.44
FAM49B-218ENST00000520887 RCOR2Q8IZ40 523 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 NDUFAF2Q8N183 169 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 CCDC33Q8N5R6 958 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 PCDH20Q8N6Y1 951 aaKnown RBP6.04□□□□□ -1.44
FAM49B-218ENST00000520887 ZNF655Q8N720 491 aaPredicted RBP6.04□□□□□ -1.44
FAM49B-218ENST00000520887 TXNDC5Q8NBS9 432 aaKnown RBP6.04□□□□□ -1.44
FAM49B-218ENST00000520887 USP33Q8TEY7 942 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 PRCCQ92733 491 aaPredicted RBP6.04□□□□□ -1.44
FAM49B-218ENST00000520887 CLDN23Q96B33 292 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 NAP1L3Q99457 506 aaPredicted RBP6.04□□□□□ -1.44
FAM49B-218ENST00000520887 PRMT1Q99873 361 aaKnown RBP6.04□□□□□ -1.44
FAM49B-218ENST00000520887 DESI2Q9BSY9 194 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 CINPQ9BW66 212 aaPredicted RBP6.04□□□□□ -1.44
FAM49B-218ENST00000520887 HDAC8Q9BY41 377 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 LZTFL1Q9NQ48 299 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 GPATCH2LQ9NWQ4 482 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 GOLGA6AQ9NYA3 693 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 MPP6Q9NZW5 540 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 UBA2Q9UBT2 640 aaPredicted RBP6.04□□□□□ -1.44
FAM49B-218ENST00000520887 DNAI1Q9UI46 699 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 XPO7Q9UIA9 1087 aaKnown RBP6.04□□□□□ -1.44
FAM49B-218ENST00000520887 TBC1D30Q9Y2I9 924 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 RAD54BQ9Y620 910 aa6.04□□□□□ -1.44
FAM49B-218ENST00000520887 LAMA2P24043 3122 aaKnown RBP6.04□□□□□ -1.44
FAM49B-218ENST00000520887 TRANK1O15050 2925 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 COL4A2P08572 1712 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 CCDC163A0A0D9SF12 145 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 A0A1W2PQ67 120 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 TARSL2A2RTX5 802 aaKnown RBP6.03□□□□□ -1.44
FAM49B-218ENST00000520887 DRGXA6NNA5 263 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 MCF2LO15068 1137 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 ALOX15BO15296 676 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 KLF4O43474 513 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 BUB1BO60566 1050 aaPredicted RBP6.03□□□□□ -1.44
FAM49B-218ENST00000520887 TJP3O95049 919 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 GOT1P17174 413 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 ERCC2P18074 760 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 TGM2P21980 687 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 HOXC13P31276 330 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 CD70P32970 193 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 SLC6A11P48066 632 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 PLK1P53350 603 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 RHOAP61586 193 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 OGDHQ02218 1023 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 SLC25A11Q02978 314 aaKnown RBP6.03□□□□□ -1.44
FAM49B-218ENST00000520887 CSTF1Q05048 431 aaKnown RBP6.03□□□□□ -1.44
FAM49B-218ENST00000520887 ZBTB16Q05516 673 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 ELAVL3Q14576 367 aaKnown RBP6.03□□□□□ -1.44
FAM49B-218ENST00000520887 PDK1Q15118 436 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 ANGPT1Q15389 498 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 RPS6KA1Q15418 735 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 CRY1Q16526 586 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 GEN1Q17RS7 908 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 ZNF528Q3MIS6 628 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 FUT11Q495W5 492 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 C5orf22Q49AR2 442 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 OTUD1Q5VV17 481 aaPredicted RBP6.03□□□□□ -1.44
FAM49B-218ENST00000520887 EGFLAMQ63HQ2 1017 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 ZNF776Q68DI1 518 aaPredicted RBP6.03□□□□□ -1.44
FAM49B-218ENST00000520887 ANO7Q6IWH7 933 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 TRNP1Q6NT89 227 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 SLC36A4Q6YBV0 504 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 DNAAF5Q86Y56 855 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 KATNAL2Q8IYT4 538 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 ALLCQ8N6M5 410 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 CCNYQ8ND76 341 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 EXD1Q8NHP7 514 aa6.03□□□□□ -1.44
FAM49B-218ENST00000520887 HNRNPLLQ8WVV9 542 aaKnown RBP6.03□□□□□ -1.44
FAM49B-218ENST00000520887 HMGB4Q8WW32 186 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms