RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ZNF284Q2VY69 593 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 FNBP1LQ5T0N5 605 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 TXNDC8Q6A555 127 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 CES5AQ6NT32 575 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 PDXDC1Q6P996 788 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 Q6ZSV7 163 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 R3HCC1LQ7Z5L2 792 aaKnown RBP3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 LURAP1LQ8IV03 231 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 SFTPA2Q8IWL1 248 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 KIAA2013Q8IYS2 634 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 GJC3Q8NFK1 279 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 SNAPC3Q92966 411 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 ZC3HAV1LQ96H79 300 aaKnown RBP3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 APOLD1Q96LR9 279 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 KLHL15Q96M94 604 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 C7orf26Q96N11 449 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 NR1H4Q96RI1 486 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 LBHD1Q9BQE6 289 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 DCLK3Q9C098 648 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 SLC25A18Q9H1K4 315 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 PNNQ9H307 717 aaKnown RBP3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 SMYD2Q9NRG4 433 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 IRAK4Q9NWZ3 460 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 A4GNTQ9UNA3 340 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 NAALADL1Q9UQQ1 740 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 FAM96BQ9Y3D0 163 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 UTYO14607 1347 aa3.42□□□□□ -1.86
HMGB1P41-201ENST00000520234 RALGAPBQ86X10 1494 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 USP47Q96K76 1375 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 KIF15Q9NS87 1388 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 A0A0U1RQF3 1178 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 A0A0U1RQG5 324 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 LRRC53A6NM62 1247 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 HSPB2A8KAH6 182 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 KDM4EB2RXH2 506 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 INSIG1O15503 277 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 ITM2AO43736 263 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 ATP2C2O75185 946 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 NDUFB4O95168 129 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 RTN3O95197 1032 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 MBD4O95243 580 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 MT-CYBP00156 380 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 TFP02787 698 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 HOXB5P09067 269 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 UBL4AP11441 157 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 CD58P19256 250 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 PSMA4P25789 261 aaKnown RBP3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 CHATP28329 748 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 THPOP40225 353 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 MLH1P40692 756 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 CXCR3P49682 368 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 CTCFP49711 727 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 CLCN5P51795 746 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 NUDT6P53370 316 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 HDAC4P56524 1084 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 CLDN2P57739 230 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 Q0VFX4 171 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 NEXNQ0ZGT2 675 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 TRAF1Q13077 416 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 ITGADQ13349 1161 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 ARHGEF6Q15052 776 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 PPP2R5BQ15173 497 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 RNPS1Q15287 305 aaKnown RBP3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 HSPB2Q16082 182 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 ESCO2Q56NI9 601 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 PRAMEF19Q5SWL8 479 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 FAAH2Q6GMR7 532 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 ZNF549Q6P9A3 640 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 ATF7IPQ6VMQ6 1270 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 DSTYKQ6XUX3 929 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 NEK10Q6ZWH5 1172 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 SLC46A3Q7Z3Q1 461 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 MB21D2Q8IYB1 491 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 FAM9BQ8IZU0 186 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 PELI3Q8N2H9 469 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 PPHLN1Q8NEY8 458 aaKnown RBP3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 ZBTB9Q96C00 473 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 FBXL8Q96CD0 374 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 MXRA8Q9BRK3 442 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 MMTAG2Q9BU76 263 aaKnown RBP3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 ZHX3Q9H4I2 956 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 MRPL44Q9H9J2 332 aaKnown RBP3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 TMEM51Q9NW97 253 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 PCDHA7Q9UN72 937 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 CAMK2AQ9UQM7 478 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 SLC45A1Q9Y2W3 748 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 PAM16Q9Y3D7 125 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 A3GALT2U3KPV4 340 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 CCDC144AA2RUR9 1427 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 ARHGAP31Q2M1Z3 1444 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 C9orf84Q5VXU9 1444 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 SCAPERQ9BY12 1400 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 CEP170Q5SW79 1584 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 PLEKHH2Q8IVE3 1493 aa3.41□□□□□ -1.86
HMGB1P41-201ENST00000520234 ITSN2Q9NZM3 1697 aa3.4□□□□□ -1.86
HMGB1P41-201ENST00000520234 IGHV4-28A0A0C4DH34 117 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 A0A1B0GVM2 712 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 A0A1B0GVT2 93 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 FAM90A8PA6NJQ4 464 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 INAFM1C9JVW0 142 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms