RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 FERMT1Q9BQL6 677 aa22.1■■□□□ 1.13
VEGFA-217ENST00000518538 RTKNQ9BST9 563 aa22.1■■□□□ 1.13
VEGFA-217ENST00000518538 TRPM6Q9BX84 2022 aa22.1■■□□□ 1.13
VEGFA-217ENST00000518538 GAREM1Q9H706 876 aa22.1■■□□□ 1.13
VEGFA-217ENST00000518538 GLOD4Q9HC38 313 aa22.1■■□□□ 1.13
VEGFA-217ENST00000518538 B4GALT6Q9UBX8 382 aa22.1■■□□□ 1.13
VEGFA-217ENST00000518538 PPIL1Q9Y3C6 166 aa22.1■■□□□ 1.13
VEGFA-217ENST00000518538 HS3ST3A1Q9Y663 406 aa22.1■■□□□ 1.13
VEGFA-217ENST00000518538 WDR87Q6ZQQ6 2873 aa22.1■■□□□ 1.13
VEGFA-217ENST00000518538 ADAMTS9Q9P2N4 1935 aa22.1■■□□□ 1.13
VEGFA-217ENST00000518538 CACNA1EQ15878 2313 aa22.09■■□□□ 1.13
VEGFA-217ENST00000518538 CFAP54Q96N23 3096 aa22.09■■□□□ 1.13
VEGFA-217ENST00000518538 A6NNZ2 444 aa22.09■■□□□ 1.13
VEGFA-217ENST00000518538 OPHN1O60890 802 aa22.09■■□□□ 1.13
VEGFA-217ENST00000518538 RBP3P10745 1247 aa22.09■■□□□ 1.13
VEGFA-217ENST00000518538 CYP2A6P11509 494 aaPredicted RBP22.09■■□□□ 1.13
VEGFA-217ENST00000518538 RBL1P28749 1068 aa22.09■■□□□ 1.13
VEGFA-217ENST00000518538 NXPH1P58417 271 aa22.09■■□□□ 1.13
VEGFA-217ENST00000518538 RPL26P61254 145 aaKnown RBP22.09■■□□□ 1.13
VEGFA-217ENST00000518538 SLC14A2Q15849 920 aa22.09■■□□□ 1.13
VEGFA-217ENST00000518538 FAM182AQ5T1J6 154 aa22.09■■□□□ 1.13
VEGFA-217ENST00000518538 LIPIQ6XZB0 460 aa22.09■■□□□ 1.13
VEGFA-217ENST00000518538 USP45Q70EL2 814 aa22.09■■□□□ 1.13
VEGFA-217ENST00000518538 ABI3BPQ7Z7G0 1075 aa22.09■■□□□ 1.13
VEGFA-217ENST00000518538 REXO1L1PQ8IX06 675 aa22.09■■□□□ 1.13
VEGFA-217ENST00000518538 NDUFAF2Q8N183 169 aa22.09■■□□□ 1.13
VEGFA-217ENST00000518538 SCRN2Q96FV2 425 aa22.09■■□□□ 1.13
VEGFA-217ENST00000518538 KLHDC7BQ96G42 594 aa22.09■■□□□ 1.13
VEGFA-217ENST00000518538 MCCC1Q96RQ3 725 aaPredicted RBP22.09■■□□□ 1.13
VEGFA-217ENST00000518538 RBM15Q96T37 977 aaKnown RBP eCLIP22.09■■□□□ 1.139e-9■■■□□ 15.3
VEGFA-217ENST00000518538 CARD9Q9H257 536 aa22.09■■□□□ 1.13
VEGFA-217ENST00000518538 PCDH9Q9HC56 1237 aa22.09■■□□□ 1.13
VEGFA-217ENST00000518538 KLHL8Q9P2G9 620 aaPredicted RBP22.09■■□□□ 1.13
VEGFA-217ENST00000518538 RPL26L1Q9UNX3 145 aaKnown RBP22.09■■□□□ 1.13
VEGFA-217ENST00000518538 CHKBQ9Y259 395 aa22.09■■□□□ 1.13
VEGFA-217ENST00000518538 H0Y8X5 98 aa22.08■■□□□ 1.13
VEGFA-217ENST00000518538 FPGTO14772 594 aa22.08■■□□□ 1.13
VEGFA-217ENST00000518538 ZNF189O75820 626 aaPredicted RBP22.08■■□□□ 1.13
VEGFA-217ENST00000518538 PRLP01236 227 aa22.08■■□□□ 1.13
VEGFA-217ENST00000518538 ELFN1P0C7U0 828 aa22.08■■□□□ 1.13
VEGFA-217ENST00000518538 VIPR1P32241 457 aa22.08■■□□□ 1.13
VEGFA-217ENST00000518538 CD68P34810 354 aaPredicted RBP22.08■■□□□ 1.13
VEGFA-217ENST00000518538 EPHB1P54762 984 aa22.08■■□□□ 1.13
VEGFA-217ENST00000518538 CLDN2P57739 230 aa22.08■■□□□ 1.13
VEGFA-217ENST00000518538 AGERQ15109 404 aa22.08■■□□□ 1.13
VEGFA-217ENST00000518538 KYAT3Q6YP21 454 aaKnown RBP22.08■■□□□ 1.13
VEGFA-217ENST00000518538 ZNF567Q8N184 647 aa22.08■■□□□ 1.13
VEGFA-217ENST00000518538 TADA1Q96BN2 335 aa22.08■■□□□ 1.13
VEGFA-217ENST00000518538 CENPTQ96BT3 561 aa22.08■■□□□ 1.13
VEGFA-217ENST00000518538 BMFQ96LC9 184 aa22.08■■□□□ 1.13
VEGFA-217ENST00000518538 FAM118BQ9BPY3 351 aa22.08■■□□□ 1.13
VEGFA-217ENST00000518538 C10orf88Q9H8K7 445 aa22.08■■□□□ 1.13
VEGFA-217ENST00000518538 GDF3Q9NR23 364 aa22.08■■□□□ 1.13
VEGFA-217ENST00000518538 TRHDEQ9UKU6 1024 aa22.08■■□□□ 1.13
VEGFA-217ENST00000518538 COQ6Q9Y2Z9 468 aa22.08■■□□□ 1.13
VEGFA-217ENST00000518538 DOCK9Q9BZ29 2069 aa22.08■■□□□ 1.12
VEGFA-217ENST00000518538 NPIPB15A6NHN6 443 aaPredicted RBP22.07■■□□□ 1.12
VEGFA-217ENST00000518538 LZTS3O60299 673 aaPredicted RBP22.07■■□□□ 1.12
VEGFA-217ENST00000518538 DFNA5O60443 496 aa22.07■■□□□ 1.12
VEGFA-217ENST00000518538 ZNF883P0CG24 379 aa22.07■■□□□ 1.12
VEGFA-217ENST00000518538 THEGLP0DJG4 465 aa22.07■■□□□ 1.12
VEGFA-217ENST00000518538 ID4P47928 161 aa22.07■■□□□ 1.12
VEGFA-217ENST00000518538 CCDC173Q0VFZ6 552 aa22.07■■□□□ 1.12
VEGFA-217ENST00000518538 PUM1Q14671 1186 aaKnown RBP eCLIP22.07■■□□□ 1.124e-7■■■□□ 16.2
VEGFA-217ENST00000518538 ZNF423Q2M1K9 1284 aa22.07■■□□□ 1.12
VEGFA-217ENST00000518538 UAP1L1Q3KQV9 507 aa22.07■■□□□ 1.12
VEGFA-217ENST00000518538 DARS2Q6PI48 645 aaKnown RBP22.07■■□□□ 1.12
VEGFA-217ENST00000518538 PID1Q7Z2X4 250 aa22.07■■□□□ 1.12
VEGFA-217ENST00000518538 TP53I13Q8NBR0 393 aaPredicted RBP22.07■■□□□ 1.12
VEGFA-217ENST00000518538 TLR10Q9BXR5 811 aa22.07■■□□□ 1.12
VEGFA-217ENST00000518538 ERVMER34-1Q9H9K5 563 aa22.07■■□□□ 1.12
VEGFA-217ENST00000518538 IL21RQ9HBE5 538 aa22.07■■□□□ 1.12
VEGFA-217ENST00000518538 FNDC3AQ9Y2H6 1198 aaKnown RBP22.07■■□□□ 1.12
VEGFA-217ENST00000518538 A0A0J9YYE9 177 aa22.06■■□□□ 1.12
VEGFA-217ENST00000518538 TCRBV7S2A1N4TA0A589 114 aa22.06■■□□□ 1.12
VEGFA-217ENST00000518538 POM121BA6NF01 834 aa22.06■■□□□ 1.12
VEGFA-217ENST00000518538 A8MX80 341 aa22.06■■□□□ 1.12
VEGFA-217ENST00000518538 KCNK3O14649 394 aa22.06■■□□□ 1.12
VEGFA-217ENST00000518538 TM4SF5O14894 197 aa22.06■■□□□ 1.12
VEGFA-217ENST00000518538 HEXIM1O94992 359 aaKnown RBP22.06■■□□□ 1.12
VEGFA-217ENST00000518538 TRBC1P01850 177 aa22.06■■□□□ 1.12
VEGFA-217ENST00000518538 CTPS1P17812 591 aa22.06■■□□□ 1.12
VEGFA-217ENST00000518538 NFKB1P19838 968 aa22.06■■□□□ 1.12
VEGFA-217ENST00000518538 IGFALSP35858 605 aa22.06■■□□□ 1.12
VEGFA-217ENST00000518538 SLC14A1Q13336 389 aa22.06■■□□□ 1.12
VEGFA-217ENST00000518538 CNGA3Q16281 694 aa22.06■■□□□ 1.12
VEGFA-217ENST00000518538 PTAR1Q7Z6K3 402 aaPredicted RBP22.06■■□□□ 1.12
VEGFA-217ENST00000518538 SPATS2Q86XZ4 545 aaKnown RBP22.06■■□□□ 1.12
VEGFA-217ENST00000518538 SLC13A5Q86YT5 568 aaPredicted RBP22.06■■□□□ 1.12
VEGFA-217ENST00000518538 LPCAT1Q8NF37 534 aa22.06■■□□□ 1.12
VEGFA-217ENST00000518538 OR13H1Q8NG92 308 aa22.06■■□□□ 1.12
VEGFA-217ENST00000518538 SPATA22Q8NHS9 363 aa22.06■■□□□ 1.12
VEGFA-217ENST00000518538 ADGRE3Q9BY15 652 aa22.06■■□□□ 1.12
VEGFA-217ENST00000518538 LAMA1P25391 3075 aa22.05■■□□□ 1.12
VEGFA-217ENST00000518538 CAPN8A6NHC0 703 aa22.05■■□□□ 1.12
VEGFA-217ENST00000518538 KCNN4O15554 427 aa22.05■■□□□ 1.12
VEGFA-217ENST00000518538 RECQL5O94762 991 aaPredicted RBP22.05■■□□□ 1.12
VEGFA-217ENST00000518538 STK10O94804 968 aaKnown RBP22.05■■□□□ 1.12
VEGFA-217ENST00000518538 ALPIP09923 528 aa22.05■■□□□ 1.12
VEGFA-217ENST00000518538 LHCGRP22888 699 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms