RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 NSUN2Q08J23 767 aaKnown RBP eCLIP10.63□□□□□ -0.71
SPIDR-205ENST00000518060 MTM1Q13496 603 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 CAMK2BQ13554 666 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 SLC18A3Q16572 532 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 ALG11Q2TAA5 492 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 MARC1Q5VT66 337 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 GUSBP11Q6P575 273 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 H2AFVQ71UI9 128 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 DPPA4Q7L190 304 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 CPNE8Q86YQ8 564 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 OR8K1Q8NGG5 319 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 HNRNPLLQ8WVV9 542 aaKnown RBP10.63□□□□□ -0.71
SPIDR-205ENST00000518060 TSACCQ96A04 125 aaPredicted RBP10.63□□□□□ -0.71
SPIDR-205ENST00000518060 DEPDC7Q96QD5 511 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 ANP32EQ9BTT0 268 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 USP29Q9HBJ7 922 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 NOD2Q9HC29 1040 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 NT5MQ9NPB1 228 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 NCKIPSDQ9NZQ3 722 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 RCOR3Q9P2K3 495 aaPredicted RBP10.63□□□□□ -0.71
SPIDR-205ENST00000518060 UVRAGQ9P2Y5 699 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 GULP1Q9UBP9 304 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 B4GALT6Q9UBX8 382 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 CSNK1G3Q9Y6M4 447 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 CHD5Q8TDI0 1954 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 FAM208BQ5VWN6 2430 aa10.63□□□□□ -0.71
SPIDR-205ENST00000518060 ZZEF1O43149 2961 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 OPA1O60313 960 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 MAFKO60675 156 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 SOCS5O75159 536 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 CSO75390 466 aaKnown RBP10.62□□□□□ -0.71
SPIDR-205ENST00000518060 KRT7P08729 469 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 ALPIP09923 528 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 PEX5P50542 639 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 TAS2R40P59535 323 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 SRP54P61011 504 aaKnown RBP10.62□□□□□ -0.71
SPIDR-205ENST00000518060 RALGDSQ12967 914 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 DPYSL3Q14195 570 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 MESDQ14696 234 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 ELOCQ15369 112 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 COL28A1Q2UY09 1125 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 ATP13A4Q4VNC1 1196 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 ODF2Q5BJF6 829 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 ARMC12Q5T9G4 340 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 ESRP1Q6NXG1 681 aaKnown RBP10.62□□□□□ -0.71
SPIDR-205ENST00000518060 MAP7D3Q8IWC1 876 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 PGBD5Q8N414 524 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 FSTL5Q8N475 847 aaPredicted RBP10.62□□□□□ -0.71
SPIDR-205ENST00000518060 FAM181AQ8N9Y4 354 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 PLA2G15Q8NCC3 412 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 SCG3Q8WXD2 468 aaKnown RBP10.62□□□□□ -0.71
SPIDR-205ENST00000518060 ECHDC3Q96DC8 303 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 NUS1Q96E22 293 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 PDXPQ96GD0 296 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 CCDC42Q96M95 316 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 WDR92Q96MX6 357 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 ZNF830Q96NB3 372 aaPredicted RBP10.62□□□□□ -0.71
SPIDR-205ENST00000518060 NUDCD1Q96RS6 583 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 MGME1Q9BQP7 344 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 APOOQ9BUR5 198 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 WDR26Q9H7D7 661 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 ABHD10Q9NUJ1 306 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 SPTLC3Q9NUV7 552 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 HAUS2Q9NVX0 235 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 PNMA8BQ9ULN7 279 aaPredicted RBP10.62□□□□□ -0.71
SPIDR-205ENST00000518060 PCDHB1Q9Y5F3 818 aa10.62□□□□□ -0.71
SPIDR-205ENST00000518060 ACACAQ13085 2346 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 LY6G6EA0A0G2JKS1 128 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 LRRD1A4D1F6 860 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 LMO7DNF2Z398 122 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 TRAFD1O14545 582 aaPredicted RBP10.61□□□□□ -0.71
SPIDR-205ENST00000518060 TPP1O14773 563 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 YY2O15391 372 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 MFAP3LO75121 409 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 PEX11BO96011 259 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 TNFP01375 233 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 CAPNS1P04632 268 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 GP1BAP07359 652 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 TMEM253P0C7T8 217 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 CYP2A6P11509 494 aaPredicted RBP10.61□□□□□ -0.71
SPIDR-205ENST00000518060 KRT10P13645 584 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 TNNT1P13805 278 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 CTPS1P17812 591 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 KELP23276 732 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 VIPR1P32241 457 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 HK3P52790 923 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 EPHB1P54762 984 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 TRAF2Q12933 501 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 ARHGEF7Q14155 803 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 PDK2Q15119 407 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 ANKRD20A8PQ5CZ79 823 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 C6orf132Q5T0Z8 1188 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 NCBP2-AS2Q69YL0 99 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 TIGD7Q6NT04 549 aaPredicted RBP10.61□□□□□ -0.71
SPIDR-205ENST00000518060 LIPIQ6XZB0 460 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 NYAP1Q6ZVC0 841 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 USP45Q70EL2 814 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 GKN2Q86XP6 184 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 VSTM4Q8IW00 320 aa10.61□□□□□ -0.71
SPIDR-205ENST00000518060 SLC35F3Q8IY50 421 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms