RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 CDH18Q13634 790 aa26.65■■□□□ 1.86
COL13A1-210ENST00000517713 GPR150Q8NGU9 434 aa26.65■■□□□ 1.86
COL13A1-210ENST00000517713 PTCD3Q96EY7 689 aaKnown RBP26.65■■□□□ 1.86
COL13A1-210ENST00000517713 XPR1Q9UBH6 696 aa26.65■■□□□ 1.86
COL13A1-210ENST00000517713 STK38LQ9Y2H1 464 aa26.65■■□□□ 1.86
COL13A1-210ENST00000517713 SPO11Q9Y5K1 396 aa26.65■■□□□ 1.86
COL13A1-210ENST00000517713 OR51B4Q9Y5P0 310 aa26.65■■□□□ 1.86
COL13A1-210ENST00000517713 RAI2Q9Y5P3 530 aa26.65■■□□□ 1.86
COL13A1-210ENST00000517713 CD3EAPO15446 510 aaKnown RBP26.65■■□□□ 1.86
COL13A1-210ENST00000517713 KPNA2P52292 529 aaKnown RBP26.65■■□□□ 1.86
COL13A1-210ENST00000517713 SLC7A9P82251 487 aa26.65■■□□□ 1.86
COL13A1-210ENST00000517713 INO80DQ53TQ3 878 aaPredicted RBP26.65■■□□□ 1.86
COL13A1-210ENST00000517713 MRNIPQ6NTE8 343 aa26.65■■□□□ 1.86
COL13A1-210ENST00000517713 ELMOD1Q8N336 334 aa26.65■■□□□ 1.86
COL13A1-210ENST00000517713 KREMEN2Q8NCW0 462 aa26.65■■□□□ 1.86
COL13A1-210ENST00000517713 TTC8Q8TAM2 541 aa26.65■■□□□ 1.86
COL13A1-210ENST00000517713 HEXDCQ8WVB3 486 aa26.65■■□□□ 1.86
COL13A1-210ENST00000517713 VWA7Q9Y334 891 aa26.65■■□□□ 1.86
COL13A1-210ENST00000517713 PCDHGC4Q9Y5F7 938 aa26.65■■□□□ 1.86
COL13A1-210ENST00000517713 PTPN4P29074 926 aa26.64■■□□□ 1.86
COL13A1-210ENST00000517713 CSKP41240 450 aa26.64■■□□□ 1.86
COL13A1-210ENST00000517713 WFDC5Q8TCV5 224 aa26.64■■□□□ 1.86
COL13A1-210ENST00000517713 MRPL46Q9H2W6 279 aaKnown RBP26.64■■□□□ 1.86
COL13A1-210ENST00000517713 NLE1Q9NVX2 485 aaPredicted RBP26.64■■□□□ 1.86
COL13A1-210ENST00000517713 ARMCX1Q9P291 453 aa26.64■■□□□ 1.86
COL13A1-210ENST00000517713 SH3BP1Q9Y3L3 701 aa26.64■■□□□ 1.86
COL13A1-210ENST00000517713 PDHA1P08559 390 aa26.63■■□□□ 1.85
COL13A1-210ENST00000517713 ALOX15P16050 662 aaPredicted RBP26.63■■□□□ 1.85
COL13A1-210ENST00000517713 ILF2Q12905 390 aaKnown RBP26.63■■□□□ 1.85
COL13A1-210ENST00000517713 PPIGQ13427 754 aaKnown RBP eCLIP26.63■■□□□ 1.85
COL13A1-210ENST00000517713 TAF1AQ15573 450 aaPredicted RBP26.63■■□□□ 1.85
COL13A1-210ENST00000517713 HTR3DQ70Z44 454 aa26.63■■□□□ 1.85
COL13A1-210ENST00000517713 OR4L1Q8NH43 312 aa26.63■■□□□ 1.85
COL13A1-210ENST00000517713 BHMTQ93088 406 aa26.63■■□□□ 1.85
COL13A1-210ENST00000517713 ALG14Q96F25 216 aa26.63■■□□□ 1.85
COL13A1-210ENST00000517713 MRPL57Q9BQC6 102 aaKnown RBP26.63■■□□□ 1.85
COL13A1-210ENST00000517713 IGSF5Q9NSI5 407 aa26.63■■□□□ 1.85
COL13A1-210ENST00000517713 DNAJC28Q9NX36 388 aa26.63■■□□□ 1.85
COL13A1-210ENST00000517713 CFAP97Q9P2B7 532 aa26.63■■□□□ 1.85
COL13A1-210ENST00000517713 LHX3Q9UBR4 397 aa26.63■■□□□ 1.85
COL13A1-210ENST00000517713 ZNF510Q9Y2H8 683 aa26.63■■□□□ 1.85
COL13A1-210ENST00000517713 TRAV19A0A0A6YYK7 116 aa26.63■■□□□ 1.85
COL13A1-210ENST00000517713 ZNF140P52738 457 aaPredicted RBP26.63■■□□□ 1.85
COL13A1-210ENST00000517713 FAM83EQ2M2I3 478 aa26.63■■□□□ 1.85
COL13A1-210ENST00000517713 MAVSQ7Z434 540 aa26.63■■□□□ 1.85
COL13A1-210ENST00000517713 GLT6D1Q7Z4J2 308 aa26.63■■□□□ 1.85
COL13A1-210ENST00000517713 LPCAT1Q8NF37 534 aa26.63■■□□□ 1.85
COL13A1-210ENST00000517713 DDI1Q8WTU0 396 aa26.63■■□□□ 1.85
COL13A1-210ENST00000517713 CDKN2AIPNLQ96HQ2 116 aa26.63■■□□□ 1.85
COL13A1-210ENST00000517713 TMEM106CQ9BVX2 250 aa26.63■■□□□ 1.85
COL13A1-210ENST00000517713 ADGRE3Q9BY15 652 aa26.63■■□□□ 1.85
COL13A1-210ENST00000517713 UNKQ9C0B0 810 aaKnown RBP26.63■■□□□ 1.85
COL13A1-210ENST00000517713 CATSPERZQ9NTU4 200 aa26.63■■□□□ 1.85
COL13A1-210ENST00000517713 VPS51Q9UID3 782 aa26.63■■□□□ 1.85
COL13A1-210ENST00000517713 DENND4CQ5VZ89 1909 aa26.62■■□□□ 1.85
COL13A1-210ENST00000517713 A0A1W2PRU2 124 aa26.62■■□□□ 1.85
COL13A1-210ENST00000517713 DLX3O60479 287 aa26.62■■□□□ 1.85
COL13A1-210ENST00000517713 SERPINA6P08185 405 aa26.62■■□□□ 1.85
COL13A1-210ENST00000517713 CALB2P22676 271 aa26.62■■□□□ 1.85
COL13A1-210ENST00000517713 CDC25CP30307 473 aa26.62■■□□□ 1.85
COL13A1-210ENST00000517713 GRIA4P48058 902 aa26.62■■□□□ 1.85
COL13A1-210ENST00000517713 CSHL1Q14406 222 aa26.62■■□□□ 1.85
COL13A1-210ENST00000517713 NCEH1Q6PIU2 408 aa26.62■■□□□ 1.85
COL13A1-210ENST00000517713 MFN1Q8IWA4 741 aa26.62■■□□□ 1.85
COL13A1-210ENST00000517713 ZNF781Q8N8C0 355 aa26.62■■□□□ 1.85
COL13A1-210ENST00000517713 MDGA1Q8NFP4 955 aa26.62■■□□□ 1.85
COL13A1-210ENST00000517713 SCG3Q8WXD2 468 aaKnown RBP26.62■■□□□ 1.85
COL13A1-210ENST00000517713 UTP4Q969X6 686 aaKnown RBP26.62■■□□□ 1.85
COL13A1-210ENST00000517713 GCNAQ96QF7 691 aa26.62■■□□□ 1.85
COL13A1-210ENST00000517713 TCF25Q9BQ70 676 aa26.62■■□□□ 1.85
COL13A1-210ENST00000517713 EMILIN2Q9BXX0 1053 aa26.62■■□□□ 1.85
COL13A1-210ENST00000517713 DRC3Q9H069 523 aa26.62■■□□□ 1.85
COL13A1-210ENST00000517713 GPAMQ9HCL2 828 aa26.62■■□□□ 1.85
COL13A1-210ENST00000517713 CRYL1Q9Y2S2 319 aa26.62■■□□□ 1.85
COL13A1-210ENST00000517713 ZNF195O14628 629 aa26.61■■□□□ 1.85
COL13A1-210ENST00000517713 GJA1P17302 382 aa26.61■■□□□ 1.85
COL13A1-210ENST00000517713 TUBB3Q13509 450 aa26.61■■□□□ 1.85
COL13A1-210ENST00000517713 AGAP9Q5VTM2 703 aa26.61■■□□□ 1.85
COL13A1-210ENST00000517713 FAM45BPQ6NSW5 357 aa26.61■■□□□ 1.85
COL13A1-210ENST00000517713 TDRD5Q8NAT2 981 aaKnown RBP26.61■■□□□ 1.85
COL13A1-210ENST00000517713 FAM45AQ8TCE6 357 aa26.61■■□□□ 1.85
COL13A1-210ENST00000517713 TBC1D10AQ9BXI6 508 aa26.61■■□□□ 1.85
COL13A1-210ENST00000517713 CDH19Q9H159 772 aa26.61■■□□□ 1.85
COL13A1-210ENST00000517713 CXXC1Q9P0U4 656 aaPredicted RBP26.61■■□□□ 1.85
COL13A1-210ENST00000517713 APOBEC2Q9Y235 224 aaKnown RBP26.61■■□□□ 1.85
COL13A1-210ENST00000517713 C2orf81A6NN90 581 aa26.61■■□□□ 1.85
COL13A1-210ENST00000517713 CAPN14A8MX76 684 aa26.61■■□□□ 1.85
COL13A1-210ENST00000517713 LTA4HP09960 611 aaKnown RBP26.61■■□□□ 1.85
COL13A1-210ENST00000517713 MYL4P12829 197 aa26.61■■□□□ 1.85
COL13A1-210ENST00000517713 OGNP20774 298 aaKnown RBP26.61■■□□□ 1.85
COL13A1-210ENST00000517713 IDH3AP50213 366 aa26.61■■□□□ 1.85
COL13A1-210ENST00000517713 ALDH18A1P54886 795 aaKnown RBP26.61■■□□□ 1.85
COL13A1-210ENST00000517713 CDKN2DP55273 166 aa26.61■■□□□ 1.85
COL13A1-210ENST00000517713 RHOAP61586 193 aa26.61■■□□□ 1.85
COL13A1-210ENST00000517713 SEMA3AQ14563 771 aa26.61■■□□□ 1.85
COL13A1-210ENST00000517713 SDCCAG8Q86SQ7 713 aaPredicted RBP26.61■■□□□ 1.85
COL13A1-210ENST00000517713 BBS7Q8IWZ6 715 aa26.61■■□□□ 1.85
COL13A1-210ENST00000517713 CPXM2Q8N436 756 aa26.61■■□□□ 1.85
COL13A1-210ENST00000517713 DCAF4L2Q8NA75 395 aa26.61■■□□□ 1.85
COL13A1-210ENST00000517713 CORO1BQ9BR76 489 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms