RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 CDH5P33151 784 aaPredicted RBP10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 CHI3L1P36222 383 aaPredicted RBP10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 IKBKEQ14164 716 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 LSM12Q3MHD2 195 aaKnown RBP10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 PPM1LQ5SGD2 360 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 SCIMPQ6UWF3 145 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 FAM156AQ8NDB6 213 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 GRIN3AQ8TCU5 1115 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 KCTD14Q9BQ13 255 aaPredicted RBP10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 HAPLN2Q9GZV7 340 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 TIMMDC1Q9NPL8 285 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 CNGB3Q9NQW8 809 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 ITM2BQ9Y287 266 aa10.89□□□□□ -0.67
PCDHGA1-202ENST00000517417 UNCXA6NJT0 531 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 CAPN14A8MX76 684 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 MFSD11O43934 449 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 TLR5O60602 858 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 APOA1P02647 267 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 FGF3P11487 239 aaPredicted RBP10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 IL2P60568 153 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 KCTD21Q4G0X4 260 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 CERCAMQ5T4B2 595 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 SCARA3Q6AZY7 606 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 ARMC6Q6NXE6 501 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 GK5Q6ZS86 529 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 GPSM1Q86YR5 675 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 MTFMTQ96DP5 389 aaKnown RBP10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 MAGED4Q96JG8 741 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 GATA5Q9BWX5 397 aaPredicted RBP10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 ZYG11BQ9C0D3 744 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 CATSPERZQ9NTU4 200 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 SELENONQ9NZV5 590 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 H2AFY2Q9P0M6 372 aaPredicted RBP10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 CYTH4Q9UIA0 394 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 FBXO5Q9UKT4 447 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 CNTNAP1P78357 1384 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 A0A087WXM4 84 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 MDM4O15151 490 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 MAN1A2O60476 641 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 MMP3P08254 477 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 THOP1P52888 689 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 ATXN1P54253 815 aaKnown RBP10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 LPIN1Q14693 890 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 PCLAFQ15004 111 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 PTPRNQ16849 979 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 NECAB2Q7Z6G3 386 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 PGAM4Q8N0Y7 254 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 CFAP52Q8N1V2 620 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 ATG16L2Q8NAA4 619 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 SIGLEC10Q96LC7 697 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 NSMCE2Q96MF7 247 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 OSBPL11Q9BXB4 747 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 ROGDIQ9GZN7 287 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 ARL15Q9NXU5 204 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 CNTN6Q9UQ52 1028 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 DYRK1BQ9Y463 629 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 PRRC2BQ5JSZ5 2229 aaKnown RBP10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 PSMD12O00232 456 aaPredicted RBP10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 AMHP03971 560 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 ASLP04424 464 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 PABPC4LP0CB38 370 aaKnown RBP10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 HNRNPLP14866 589 aaKnown RBP eCLIP10.88□□□□□ -0.674e-10■■■■■ 68.5
PCDHGA1-202ENST00000517417 XRCC1P18887 633 aaPredicted RBP10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 GSSP48637 474 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 DLG2Q15700 870 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 SLC25A52Q3SY17 297 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 TRIM60Q495X7 471 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 SAMD4BQ5PRF9 694 aaKnown RBP10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 ADGRG6Q86SQ4 1221 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 ZNF513Q8N8E2 541 aaPredicted RBP10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 TRPC4APQ8TEL6 797 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 RNF145Q96MT1 663 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 OR52B2Q96RD2 323 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 TBCDQ9BTW9 1192 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 C2orf49Q9BVC5 232 aaPredicted RBP10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 ASB8Q9H765 288 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 PNPLA3Q9NST1 481 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 XPR1Q9UBH6 696 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 CDV3Q9UKY7 258 aaKnown RBP10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 PADI4Q9UM07 663 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 SORBS2O94875 1100 aaKnown RBP10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 IGSF6O95976 241 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 LRPAP1P30533 357 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 CYP2C18P33260 490 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 OR1D2P34982 312 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 ZNF135P52742 658 aaPredicted RBP10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 MAPK10P53779 464 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 CDH13P55290 713 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 CLDN10P78369 228 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 SMAD3P84022 425 aaKnown RBP10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 TCEA2Q15560 299 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 DEPDC1Q5TB30 811 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 IL27RAQ6UWB1 636 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 PYROXD2Q8N2H3 581 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 PTGR2Q8N8N7 351 aaPredicted RBP10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 OR56A4Q8NGH8 313 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 MCOLN3Q8TDD5 553 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 HDAC10Q969S8 669 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 EMID1Q96A84 441 aaPredicted RBP10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 PHF12Q96QT6 1004 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms