RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 CCDC25Q86WR0 208 aa4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 LURAP1LQ8IV03 231 aa4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 UEVLDQ8IX04 471 aa4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 SLC35F3Q8IY50 421 aa4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 ZCCHC9Q8N567 271 aaKnown RBP4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 PI4KAP1Q8N8J0 262 aa4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 TC2NQ8N9U0 490 aa4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 ACTRT2Q8TDY3 377 aa4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 PTERQ96BW5 349 aa4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 CEP295NLQ96MC4 621 aa4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 CFAP57Q96MR6 1250 aa4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 GBP5Q96PP8 586 aa4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 RAB3IPQ96QF0 476 aaPredicted RBP4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 SIN3AQ96ST3 1273 aa4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 CITED2Q99967 270 aaPredicted RBP4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 MXRA8Q9BRK3 442 aa4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 THUMPD3Q9BV44 507 aaKnown RBP4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 ZCCHC4Q9H5U6 513 aa4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 ACTR5Q9H9F9 607 aaPredicted RBP4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 MAGEE1Q9HCI5 957 aa4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 CHCHD3Q9NX63 227 aaKnown RBP4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 PSD3Q9NYI0 1048 aa4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 PLEKHB1Q9UF11 243 aaPredicted RBP4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 AMACRQ9UHK6 382 aa4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 BTBD3Q9Y2F9 522 aa4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 R3HDM2Q9Y2K5 976 aaKnown RBP4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 EPN1Q9Y6I3 576 aaPredicted RBP4.38□□□□□ -1.71
RNU6-488P-201ENST00000515918 A0A0U1RQF3 1178 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 LNP1A1A4G5 178 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 SLC22A23A1A5C7 686 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 C1orf226A1L170 272 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 FMO6PO60774 539 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 RECQL5O94762 991 aaPredicted RBP4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 TMCC1O94876 653 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 NFATC1O95644 943 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 C8AP07357 584 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 HNRNPCP07910 306 aaKnown RBP eCLIP4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 HKR1P10072 659 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 ANXA7P20073 488 aaKnown RBP4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 ATP5F1P24539 256 aaPredicted RBP4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 MCM7P33993 719 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 PTGS2P35354 604 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 CLK1P49759 484 aaKnown RBP4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 MMP14P50281 582 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 NPY4RP50391 375 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 CLCNKBP51801 687 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 CSE1LP55060 971 aaKnown RBP4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 ECT2LQ008S8 904 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 KLF10Q13118 480 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 KCNC3Q14003 757 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 NFE2L1Q14494 772 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 CDSNQ15517 529 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 PKN2Q16513 984 aaKnown RBP4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 KRT24Q2M2I5 525 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 HYAL4Q2M3T9 481 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 TCTN1Q2MV58 587 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 LETM2Q2VYF4 491 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 USP41Q3LFD5 358 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 RARS2Q5T160 578 aaKnown RBP4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 DAB2IPQ5VWQ8 1189 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 CST9LP1Q5W188 147 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 EPHX4Q8IUS5 362 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 PALM2Q8IXS6 379 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 SCYL3Q8IZE3 742 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 NUP93Q8N1F7 819 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 LCORLQ8N3X6 602 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 GJC3Q8NFK1 279 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 HUS1BQ8NHY5 278 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 MGARPQ8TDB4 240 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 WIPF2Q8TF74 440 aaPredicted RBP4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 SNAPC3Q92966 411 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 IGSF8Q969P0 613 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 PLEKHG4BQ96PX9 1271 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 CDRT15Q96T59 188 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 C1QTNF1Q9BXJ1 281 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 DENND2DQ9H6A0 471 aaPredicted RBP4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 BPIFA1Q9NP55 256 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 PARD6AQ9NPB6 346 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 DDX4Q9NQI0 724 aaKnown RBP4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 LRIT1Q9P2V4 623 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 ADAM21Q9UKJ8 722 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 MAU2Q9Y6X3 613 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 A3GALT2U3KPV4 340 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 ZNF644Q9H582 1327 aaPredicted RBP4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 GPRASP1Q5JY77 1395 aa4.37□□□□□ -1.71
RNU6-488P-201ENST00000515918 TYW5A2RUC4 315 aaKnown RBP4.36□□□□□ -1.71
RNU6-488P-201ENST00000515918 H0YAE9 185 aa4.36□□□□□ -1.71
RNU6-488P-201ENST00000515918 ZC3H11AO75152 810 aaKnown RBP eCLIP4.36□□□□□ -1.71
RNU6-488P-201ENST00000515918 ZNF202O95125 648 aa4.36□□□□□ -1.71
RNU6-488P-201ENST00000515918 PLAUP00749 431 aa4.36□□□□□ -1.71
RNU6-488P-201ENST00000515918 CD63P08962 238 aa4.36□□□□□ -1.71
RNU6-488P-201ENST00000515918 ETFAP13804 333 aa4.36□□□□□ -1.71
RNU6-488P-201ENST00000515918 FDPSP14324 419 aaKnown RBP4.36□□□□□ -1.71
RNU6-488P-201ENST00000515918 EPHB2P29323 1055 aa4.36□□□□□ -1.71
RNU6-488P-201ENST00000515918 TCF7P36402 384 aaPredicted RBP4.36□□□□□ -1.71
RNU6-488P-201ENST00000515918 TAS2R40P59535 323 aa4.36□□□□□ -1.71
RNU6-488P-201ENST00000515918 YPEL5P62699 121 aa4.36□□□□□ -1.71
RNU6-488P-201ENST00000515918 SLMAPQ14BN4 828 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms