RNA–Protein interactions for RNA: ENST00000515621.5

NR1I3-234, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-234ENST00000515621 TRAF2Q12933 501 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 SMAD4Q13485 552 aaKnown RBP9.12□□□□□ -0.95
NR1I3-234ENST00000515621 HTR4Q13639 388 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 THOC5Q13769 683 aaKnown RBP9.12□□□□□ -0.95
NR1I3-234ENST00000515621 GRIN2CQ14957 1233 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 DLG2Q15700 870 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 DBN1Q16643 649 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 AARS2Q5JTZ9 985 aaKnown RBP9.12□□□□□ -0.95
NR1I3-234ENST00000515621 DGKKQ5KSL6 1271 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 TEDDM1Q5T9Z0 273 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 KCTD16Q68DU8 428 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 TRMT10BQ6PF06 316 aaKnown RBP9.12□□□□□ -0.95
NR1I3-234ENST00000515621 PACS1Q6VY07 963 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 LEKR1Q6ZMV7 388 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 CAPN12Q6ZSI9 719 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 USP45Q70EL2 814 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 RASSF3Q86WH2 238 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 CTAGE3PQ8IX95 158 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 PHTF2Q8N3S3 785 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 PPM1NQ8N819 430 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 DTX3LQ8TDB6 740 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 DNASE1L2Q92874 299 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 MARVELD3Q96A59 401 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 RMDN1Q96DB5 314 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 MFSD3Q96ES6 412 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 CABS1Q96KC9 395 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 FCRL3Q96P31 734 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-234ENST00000515621 RBBP8Q99708 897 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 CDH19Q9H159 772 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 RHOJQ9H4E5 214 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 CCDC134Q9H6E4 229 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 FBRSQ9HAH7 460 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 PLSCR2Q9NRY7 297 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 C20orf96Q9NUD7 363 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-234ENST00000515621 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-234ENST00000515621 BCCIPQ9P287 314 aaKnown RBP eCLIP9.12□□□□□ -0.95
NR1I3-234ENST00000515621 PHTF1Q9UMS5 762 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 PLA2G4CQ9UP65 541 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 STARD13Q9Y3M8 1113 aa9.12□□□□□ -0.95
NR1I3-234ENST00000515621 USP15Q9Y4E8 981 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-234ENST00000515621 COL4A3Q01955 1670 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 KIAA1549LQ6ZVL6 1849 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 A0A0J9YYE9 177 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 EDDM13A0A1B0GTR0 161 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 FAM47DPA6NHR8 397 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 SMIM23A6NLE4 172 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 K7ERQ8 282 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 ZWINTO95229 277 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 TRBC1P01850 177 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 MT-ND3P03897 115 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 PRNPP04156 253 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 HNRNPLP14866 589 aaKnown RBP eCLIP9.11□□□□□ -0.95
NR1I3-234ENST00000515621 BRAFP15056 766 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 ARSAP15289 507 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 ZNF30P17039 623 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 TPH1P17752 444 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 LPOP22079 712 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-234ENST00000515621 ARNTP27540 789 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 NMBRP28336 390 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 HMGCLP35914 325 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 GRIA2P42262 883 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 MAGEA12P43365 314 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 TNFRSF4P43489 277 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 SERPINB8P50452 374 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 CCNHP51946 323 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-234ENST00000515621 EPHB1P54762 984 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 PRAMEP78395 509 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 SLC18A2Q05940 514 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 MTM1Q13496 603 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 OLIG2Q13516 323 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 ENPP2Q13822 863 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 SEPT6Q14141 434 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 ADGRE1Q14246 886 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 ELAVL3Q14576 367 aaKnown RBP9.11□□□□□ -0.95
NR1I3-234ENST00000515621 CNGA3Q16281 694 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 GEN1Q17RS7 908 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 INSCQ1MX18 579 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 RNF187Q5TA31 235 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-234ENST00000515621 TMEM215Q68D42 235 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 MRNIPQ6NTE8 343 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 ESRP1Q6NXG1 681 aaKnown RBP9.11□□□□□ -0.95
NR1I3-234ENST00000515621 AFTPHQ6ULP2 937 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 GLT6D1Q7Z4J2 308 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 DSG4Q86SJ6 1040 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 SRRM1Q8IYB3 904 aaKnown RBP9.11□□□□□ -0.95
NR1I3-234ENST00000515621 CBARPQ8N350 705 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-234ENST00000515621 SLC25A41Q8N5S1 370 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 C2CD4AQ8NCU7 369 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-234ENST00000515621 LPCAT1Q8NF37 534 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 OR13J1Q8NGT2 312 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 OR2A12Q8NGT7 310 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 PIH1D2Q8WWB5 315 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 SCRN2Q96FV2 425 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 EXOC2Q96KP1 924 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 GPR22Q99680 433 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 HEPHQ9BQS7 1158 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 TM6SF2Q9BZW4 377 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 EBF3Q9H4W6 596 aa9.11□□□□□ -0.95
NR1I3-234ENST00000515621 PPANQ9NQ55 473 aaKnown RBP9.11□□□□□ -0.95
NR1I3-234ENST00000515621 SMYD2Q9NRG4 433 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms